Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00887 ATGGCAGTGGAGTTGATGAGATTCCCCAAAATGGATGAACAGAAGGCAATTCAAGAAGCAGCCTCGGAGGGCCTCAAGGGAATGGAAAACCTCATCCATCTCCTCTCCCACCAACCCTCCCATCTCAACACTCACGACACCGATGCAACTGTTTCAAACTTCAAGAAACTCATCTCCTTACTCAACCGCACCGGCCACGCCCGTTTCCGCCGCGCACCACTTCCTTCAAACACCCAACCCACTCCACCGGCTAACCCGGTCACTCTCCACCAACCTCCCTCCACTTTCGCCCCCACGCACTCTCACACTCTCACTCTCGATTTCACCAAACCCAACATCCTCGCCTCCACCAACGCCAAATCCATGGATCTCGAATTCTCCAAGGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATCTCCTCTGCCATCACCGCCGACGGCAGCGTCTCCAACGGCAACCAAGGCTCCTCTCTCTTCCTCACCCCGCCTCCGCGGTCGTCTTCAGCCGGAAAACCGCCTCTCGTGAAGAAGAGATGCCACGACCACTCCGACGACGTCTCCGGTAAACTCTCCGGGTCCACCAAGTGCCACTGCAGCAAAAGAAGGAAGAATCGTGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGTTCGAAAATCGCCGATATTCCGTCGGACGAGTATTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCACCGTACCCGAGAGGATATTACAAGTGCAGTTCGGTTAGAGGGTGTCCTGCGAGGAAACACGTGGAGCGTGCCTCGGACGATCCCACGATGTTGATTGTGACGTACGAGGGGGAGCACCGTCACTCGATTCAGACCGCGATGCAGGAGAACATTTCCGGGGCCTTGGCTTTGGCATTCGAGTCAACCTAG 912 0.5592 MAVELMRFPKMDEQKAIQEAASEGLKGMENLIHLLSHQPSHLNTHDTDATVSNFKKLISLLNRTGHARFRRAPLPSNTQPTPPANPVTLHQPPSTFAPTHSHTLTLDFTKPNILASTNAKSMDLEFSKETFSVSSNSSFISSAITADGSVSNGNQGSSLFLTPPPRSSSAGKPPLVKKRCHDHSDDVSGKLSGSTKCHCSKRRKNRVKKTVRVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERASDDPTMLIVTYEGEHRHSIQTAMQENISGALALAFEST 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00887 303 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g00887 303 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 287 IPR044810 GO:0003700
Spst9g00887 303 SMART WRKY_cls 224 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g00887 303 MobiDBLite consensus disorder prediction 71 90 - -
Spst9g00887 303 Gene3D WRKY domain 213 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g00887 303 Pfam Plant zinc cluster domain 177 222 IPR018872 -
Spst9g00887 303 SUPERFAMILY WRKY DNA-binding domain 222 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g00887 303 ProSiteProfiles WRKY domain profile. 219 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g00887 303 MobiDBLite consensus disorder prediction 175 189 - -
Spst9g00887 303 MobiDBLite consensus disorder prediction 155 197 - -
Spst9g00887 303 FunFam WRKY transcription factor 65 208 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00887 Spst-Chr9 7760290 7761734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00887 1 302 WRKY Transcription Factor Family AT2G24570 59.692 4.15e-114 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g00887 WRKY 3.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00887 - - gmx:100127394 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00887 9 7760290 7761734 Spst9g00887 9 7760290 7761734 ECH