Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g00887 | ATGGCAGTGGAGTTGATGAGATTCCCCAAAATGGATGAACAGAAGGCAATTCAAGAAGCAGCCTCGGAGGGCCTCAAGGGAATGGAAAACCTCATCCATCTCCTCTCCCACCAACCCTCCCATCTCAACACTCACGACACCGATGCAACTGTTTCAAACTTCAAGAAACTCATCTCCTTACTCAACCGCACCGGCCACGCCCGTTTCCGCCGCGCACCACTTCCTTCAAACACCCAACCCACTCCACCGGCTAACCCGGTCACTCTCCACCAACCTCCCTCCACTTTCGCCCCCACGCACTCTCACACTCTCACTCTCGATTTCACCAAACCCAACATCCTCGCCTCCACCAACGCCAAATCCATGGATCTCGAATTCTCCAAGGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATCTCCTCTGCCATCACCGCCGACGGCAGCGTCTCCAACGGCAACCAAGGCTCCTCTCTCTTCCTCACCCCGCCTCCGCGGTCGTCTTCAGCCGGAAAACCGCCTCTCGTGAAGAAGAGATGCCACGACCACTCCGACGACGTCTCCGGTAAACTCTCCGGGTCCACCAAGTGCCACTGCAGCAAAAGAAGGAAGAATCGTGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGTTCGAAAATCGCCGATATTCCGTCGGACGAGTATTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCACCGTACCCGAGAGGATATTACAAGTGCAGTTCGGTTAGAGGGTGTCCTGCGAGGAAACACGTGGAGCGTGCCTCGGACGATCCCACGATGTTGATTGTGACGTACGAGGGGGAGCACCGTCACTCGATTCAGACCGCGATGCAGGAGAACATTTCCGGGGCCTTGGCTTTGGCATTCGAGTCAACCTAG | 912 | 0.5592 | MAVELMRFPKMDEQKAIQEAASEGLKGMENLIHLLSHQPSHLNTHDTDATVSNFKKLISLLNRTGHARFRRAPLPSNTQPTPPANPVTLHQPPSTFAPTHSHTLTLDFTKPNILASTNAKSMDLEFSKETFSVSSNSSFISSAITADGSVSNGNQGSSLFLTPPPRSSSAGKPPLVKKRCHDHSDDVSGKLSGSTKCHCSKRRKNRVKKTVRVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERASDDPTMLIVTYEGEHRHSIQTAMQENISGALALAFEST | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g00887 | 303 | Pfam | WRKY DNA -binding domain | 226 | 282 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00887 | 303 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 15 | 287 | IPR044810 | GO:0003700 | |
Spst9g00887 | 303 | SMART | WRKY_cls | 224 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00887 | 303 | MobiDBLite | consensus disorder prediction | 71 | 90 | - | - | |
Spst9g00887 | 303 | Gene3D | WRKY domain | 213 | 284 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00887 | 303 | Pfam | Plant zinc cluster domain | 177 | 222 | IPR018872 | - | |
Spst9g00887 | 303 | SUPERFAMILY | WRKY DNA-binding domain | 222 | 284 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00887 | 303 | ProSiteProfiles | WRKY domain profile. | 219 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00887 | 303 | MobiDBLite | consensus disorder prediction | 175 | 189 | - | - | |
Spst9g00887 | 303 | MobiDBLite | consensus disorder prediction | 155 | 197 | - | - | |
Spst9g00887 | 303 | FunFam | WRKY transcription factor 65 | 208 | 285 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g00887 | Spst-Chr9 | 7760290 | 7761734 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g00887 | 1 | 302 | WRKY Transcription Factor Family | AT2G24570 | 59.692 | 4.15e-114 | 330 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Spst9g00887 | WRKY | 3.5e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g00887 | - | - | gmx:100127394 | 468.003 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst9g00887 | 9 | 7760290 | 7761734 | Spst9g00887 | 9 | 7760290 | 7761734 | ECH |