Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00848 ATGCTTTGTGTATGGCCGGTTCTGAGAATGTACATTTCTTGCCAGATTCTTCTTTGTATTGATGTTGCTGCAACTTCTGCTAAGTCGGCAAAGATGTCTCATCAATTACTTAAACAGGCTGAAAATATGTTGTCTGATATATATCCAGGAGGATCTCCCAAAGAAGGCTCCACTTATTGGGATCAGATCCTTGAGATAGGGGTCATCTCTGTGTCAGGGCGTCTTCTGAAGCGCTTACACAAGTTCTTGGAGCAGTTTTCTGTTACTGACTCTGTGTATTTCAGCTCTGACAACCCTCCAGCACTTCAGGCAATTCTGTCTGGGGAAGTTGTTGTGACATCATCTAAAGAGTCCCACCGGCAAGAGCAGAGGGAGCGCGCTCTTGCTTTGCTCCATCTGATGATTGATGATGCTCATATGGGCAAGAGGCAGTTTTTGAGTGGTAAGCTTCATAACCTTGCAAGAGCTGTTGCTGATGAAGAAACTGAATCAAGTACTACTAGGGGTGAAGGATTGTATGCTGATCAGGGTGTTACTTCCAACAGTGACAAGGACGTAGTACTCGGGCTTGGGTTAAGAGTTGTTAAACAAATACCTTTAAGTTCAAGTGGAGGAGAGTCTAGCTTGCAGTCTACTAGTTATGACATTAAAGATGCTGGGAAGAGAATATTTGTTCCATTGAGTGGCAAACCCATGACATATCTGTCACAATTCATTCTTCATGTTGCTGCAATTGGTGACATAGTTGATGGGACTGATACTACTCATGATTTTAACTTTTTCTCTGTCGTTTATGAGTGGCCTAAGGATCTGTTGACCCGTCTTGTTTTTGAAAGAGGCAGTACTGATGCTGCTGGGAAGGTAGCAGAAATTATGTATGCGGATTTTGTACATGAGGTGATTTCTGCATGTGTGCCTCCAGTTTATCCTCCACGGTCGGGGCATGGATGGGCCTGCATTCCAGTTGTTCCTACCTTCCCTAAGAGTAGCTCTGAAAATAAAGTGCTGTCTCCCTCATCTAAAGATGCAAAACCTAATTGCTATTGCCGATCTTCAGCAACACCTGGAGTGGCTTTGTACCCTCTCCAGTTGGATGTGGTGAAACATTTGGCAAAAATATCCCCAGTGAGGGCTGTTTTAGCATGTGTATTTGGGAGTAGTATACTGTACAACAGCAGTAGCTCATCAATTTCAAGCTCCTTGAGTGATGGATTACTTCAGGCTCCTGATGCTGATAGGTTGTTTTACGAGTTTGCTCTTGATCAATCTGAAAGGTTCCCGACTCTGAACAGATGGATACAGATGCAAACTAACCTCCATCGTGTGTCAGAGTTTGCTGTAACTGCAAATCAAACAGCTGATGACAGCAATCTTGAAGCAAGAACTTCTGTTAAGAGAGTTCGTGAACATGACAATGAGACAGAGTCAGATGCTGATGATATAGTTAGTAGCAGTACAATCCCTGTAGCTCTGGCTGACCTAAGTAGCCATGGGATTGAAGCTACAGATTTCTGGCTCGATTCCTCAAAATCTGAAGCTTCTCAACCTGACACGAAAGTTTTTCTTTCTTTTGATTGGGATAATGAACAACCATATGAAAGGGCAGTAGAACGACTAATTGATGAAGGAAAGCTTATGGATGCTCTTGCACTTTCTGATCGCTTTCTACGGAATGGGGCCTCTGATCAGCTTCTTCAGTTAGTCATTGAACGAACAGAAGAAGTCCATTCAAATTCCACACAGCATCAAGGATTTGGGGGACGAAATATTTGGAGCAACAGTTGGCAGTATTGCTTAAGGTTGAACGACAAACAGCTGGCTGCTAGATTAGCCCTAAGGTATGTACACTCATGGGAATTAGATGCTGCTTTGGATGTTCTCACAATGTGCTGCTGCCATCTTCCTGAGAATGATTCCATAAGGAAGGAGTGCATACCTGATGCCGGCTGTTTGGGTTCTGAGTACATTTTTGATAATGTTTTGCAAATGAAACAAGCTTTGCAGAGGTACAGCCATATATTGAGTGCAGACGATCATTATGCAAGCTGGCAAGAGGTTGAAGCAGATTGCAAGGAAGATCCAGAGGGTCTGGCACTTAGGTTAGCTGGAAAAGGAGCTGTTTCTGCTGCACTTAAAGTGGCAGAAAGTGCAGGATTATCAATTGATTTACGTAGAGAATTGCAGGGGCGGCAGCTTGTGAAGCTTCTGACAGCTGACCCTCTTAACGGAGGAGGACCAGCTGAAGCTTCACGCTTTCTTTCTTCGTTAAGGGACACAGATGATGCTTTGCCAGTTGCTATGGGTGCAATGCAGCTTTTACCCAATTTGCGCTCTAAGCAACTTCTTGTTCACTTCTTCCTAAAACGAAGAGAAGGGAATCTGACTGATGTTGAGATTTCCCGGCTTAATTCATGGGCTTTAGGGCTTCGTGTGCTGTCTGTCTTGCCCTTGCCATGGCAACAAAGCTATGATAGTGAAGCATTTAGGATACCCTTGCCTTATATATTAAAGGAATTTCCTTCTTTAAGAGACAACCACATAATTACTACATATGCAACTAAGGCTATTGCTGTCAGTATCAGCTCGCCTCCTAGGGAACATCGCATATCTGTTTCAGGATCCAGACCAAAGCAGAAGACAAGATCAGGTGCTCCACAAAGATCATCTTTTACAAGCAGTCTAAGTAACTTACAAAAAGAGGCTCGAAGAGCTTTTTCATGGGCTCCAAAAAATAGCGTGGACAAAAATGCTCCAAAAGATGTTTATAGGAAAAGAAAAAGTTCTGGACTGTCTCCCTCTGATAGAGTTGCTTGGGAAGCAATGACTGGAATACAAGAGGACCGTATTTCATCTTTTTCAACAGATGGGCAAGAGAGGCTTCCTTCTGTTTCTATTACTGAGGAATGGATGCTTACAGGTGACCCACCAAAAGATGAAAGCATTCGCTCTTCTCACAGATATGAAAGTGCCCCTGACATTACACTGTTCAAGGCACTGCTTGCTCTTTGTTCTGATGACTCAGTCTCGGCCAAAATTGCCCTTGATTTGTGCATTAATCAAATGAAGAATGTCTTGAACTCTCAGCTGTTGCCTGAGAATGCATCTATGGAAACAATTGGGCGAGCATATCATGCCACAGAAACATTTGTCCAGGGTCTGCTCTATGCCAAATCCCTGCTAAGAAAGCTCGCCGGTGGTAGTGAATTGCCAAGTAATTGGGAAAGAAATAGAGATACTGATGACACATCATCTGATGCTGGTAGCTCCAGTGTGGGTAGTCAATCCACAGATGAGCTTTCTGAAATCTTGTCACAGGCGGATACCTGGCTGGGTCGTGCAGAGCTGCTCCAAAGCCTTTTGGGGTCAGGGATTGCTGCTTCTCTTGATGACATAGCTGATGGAGAGTCATCCGCCCGACTTCGCGACAGGTTGGTTGCAGAGGAACGGTACAGCATGGCTGTGTATACTTGCAAAAAGTGTAAGATTGATGTCTTTCCGGTGTGGAATGCATGGGGTCACGCATTAATTCGGATGGAGCGCTACGGACATGCTCGTGTGAAATTTAAGCAAGCTCTTCAGTTGTACAAGGGTGATCCTGGACCTGTTATTCTAGACATTATTAATACAATAGAAGGTGGCCCACCAGTTGATGTTTCAGCTGTTCGTTCTATGTATGAACACCTGGCTAAAAGTGCGCCCACAATCTTGGATGATTCTCTTTCTGCTGATTCATATCTAAACATCTTATACATGCCATCAACATTCCCCCGTTCAGAGAGGTCACGACGATCACAACTGTCTGCAAATAATAATTCTGTGTATAGTCCAGACTTTGAAGATGGTCCTCGAAGTAACCTGGATAATGGTAGATATGCTGAATGTGTTAATTACTTAAAAGAGTATGCTCGCCAGCATTTGCTTGGCTTTATGTTTAGGCATGGTCACTACCATGATGCTTGCTTCTTGTTCTTTCCCCTTGATGAAGTTCCACCACCACCACAACCATCAATCACAAGTGGAGTGTCTTCTTCATCACCCCAAAGACTAGATTCTTTGGCAACTGATTATGGAACAATTGATGACCTGTGTGAATTCTGCATTGGTTATGGTGCTATGCCTATTTTGGAGGAAGTCCTTTCAACTAGAATGTCATCAACTGAATCCCAGGATGCAGTGGTGAATCAGTATACAGTGACAGCCCTTGCCCGTATTTGCCTCTATTGTGAAACTCACAAGCATTTCAATTATTTATACAGGTTTCAGGTAATCAAAATGGACCATGTTGCTGCTGGACTATGTTGCATTCAGTTGTTTGTGAATTCTTCTTCACAAGAGGAAGCCATTAGACATTTGGAACATGCCAAGATGCACTTTGATGAAGGATTGTCTGCAAGGCACAAAGGTGGGGAATCTACTAAGCTTGTAACAAAAGGTCTTAGAGGAAAAAGTGCATCTGAAAAGCTGACAGAAGAAGGTCTTGTAAAATTTTCTGCTCGGGTATCAATCCAGGTTGAAGTTGTTAAATCCTTTAATGACTCAGAAGGACCTCAATGGAAACATTCACTTTTTGGGAATCCAAATGATCCAGAAACTTTTAGAAGAAGGTGTAAAATTGCAGAGGTTCTTGTGGAGAAGAATTTTGATTTGGCATTCCAACTGATCTATGAATTCAATCTTCCTGCTGTTGATATATATGCTGGTGTTGCTGCATCTCTTGCTGAGAGAAAAAGAGGCAGCCAATTGACAGAATTCTTTAGAAACATCAAGGGCACAATAGATGACGATGACTGGGATCAGGTCTTAGGTGCTGCAATAAATGTATATGCAAACAAGCATAAAGAGCGTCCAGACCGTTTGATAGACATGTTAACTAGCAGCCACAGAAAGGTTCTTGCTTGTGTAGTTTGTGGTCGATTAAAAAGTGCATTTCAAATTGCTTCACGGAGTGGTAGTGTGGCAGATGTTCAATATGTTGCTCATCAGGCACTGCATGCAAATGCACTTCCCGTGCTTGATATGTGTAAGCAATGGTTGGCTCAATACATTGGATTTCTTGGTCGAGTTAGAAGACGCTCAAGTGGCGAAATGACCTCGGTTTCAAGTACCATCTTTCCAGCATTTGGCACTCCCATCTTTGATTTCGAAGGTTACTCCAACCTAAGAAAATACGTCATTGCTCCCTATGACCGTAGATATCAATTGTGGCAAACGTTCCTAGTGGCATTGGTAGTGTACTCTGCGTGGGCATCTCCATTCGAGATAGCTTTCAGAAAACTGTTAGTTGGGTCGTTGTTGCCCGTTGATCTCTTTGTTGATGCCTTCTTTGCGGTCGATATAATCCTTACTTTCTTTGTGGCTTACTTGGATAAGTCAACTTATCTCTTCGTTGACGATCATAAGAAAATTGCTCTTAGGTACGTCAAAAAGTCACACTTCACTATGGATCTGGCCTCTACTGTGCCAATTGGGCAGATATATCAAATCATGACGGGCAAGCCAACCAAAAGCGAGGTATTTGGTTTCCTAATTATGTTAAGACTCTGGCGATTGAGACGTGTTGGTAAACTCTTCGCAAGGTACGTTCACAAACGAAAGCAAGAGCAAACTCAATAA 5613 0.4306 MLCVWPVLRMYISCQILLCIDVAATSAKSAKMSHQLLKQAENMLSDIYPGGSPKEGSTYWDQILEIGVISVSGRLLKRLHKFLEQFSVTDSVYFSSDNPPALQAILSGEVVVTSSKESHRQEQRERALALLHLMIDDAHMGKRQFLSGKLHNLARAVADEETESSTTRGEGLYADQGVTSNSDKDVVLGLGLRVVKQIPLSSSGGESSLQSTSYDIKDAGKRIFVPLSGKPMTYLSQFILHVAAIGDIVDGTDTTHDFNFFSVVYEWPKDLLTRLVFERGSTDAAGKVAEIMYADFVHEVISACVPPVYPPRSGHGWACIPVVPTFPKSSSENKVLSPSSKDAKPNCYCRSSATPGVALYPLQLDVVKHLAKISPVRAVLACVFGSSILYNSSSSSISSSLSDGLLQAPDADRLFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDSNLEARTSVKRVREHDNETESDADDIVSSSTIPVALADLSSHGIEATDFWLDSSKSEASQPDTKVFLSFDWDNEQPYERAVERLIDEGKLMDALALSDRFLRNGASDQLLQLVIERTEEVHSNSTQHQGFGGRNIWSNSWQYCLRLNDKQLAARLALRYVHSWELDAALDVLTMCCCHLPENDSIRKECIPDAGCLGSEYIFDNVLQMKQALQRYSHILSADDHYASWQEVEADCKEDPEGLALRLAGKGAVSAALKVAESAGLSIDLRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDTDDALPVAMGAMQLLPNLRSKQLLVHFFLKRREGNLTDVEISRLNSWALGLRVLSVLPLPWQQSYDSEAFRIPLPYILKEFPSLRDNHIITTYATKAIAVSISSPPREHRISVSGSRPKQKTRSGAPQRSSFTSSLSNLQKEARRAFSWAPKNSVDKNAPKDVYRKRKSSGLSPSDRVAWEAMTGIQEDRISSFSTDGQERLPSVSITEEWMLTGDPPKDESIRSSHRYESAPDITLFKALLALCSDDSVSAKIALDLCINQMKNVLNSQLLPENASMETIGRAYHATETFVQGLLYAKSLLRKLAGGSELPSNWERNRDTDDTSSDAGSSSVGSQSTDELSEILSQADTWLGRAELLQSLLGSGIAASLDDIADGESSARLRDRLVAEERYSMAVYTCKKCKIDVFPVWNAWGHALIRMERYGHARVKFKQALQLYKGDPGPVILDIINTIEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYLNILYMPSTFPRSERSRRSQLSANNNSVYSPDFEDGPRSNLDNGRYAECVNYLKEYARQHLLGFMFRHGHYHDACFLFFPLDEVPPPPQPSITSGVSSSSPQRLDSLATDYGTIDDLCEFCIGYGAMPILEEVLSTRMSSTESQDAVVNQYTVTALARICLYCETHKHFNYLYRFQVIKMDHVAAGLCCIQLFVNSSSQEEAIRHLEHAKMHFDEGLSARHKGGESTKLVTKGLRGKSASEKLTEEGLVKFSARVSIQVEVVKSFNDSEGPQWKHSLFGNPNDPETFRRRCKIAEVLVEKNFDLAFQLIYEFNLPAVDIYAGVAASLAERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYIGFLGRVRRRSSGEMTSVSSTIFPAFGTPIFDFEGYSNLRKYVIAPYDRRYQLWQTFLVALVVYSAWASPFEIAFRKLLVGSLLPVDLFVDAFFAVDIILTFFVAYLDKSTYLFVDDHKKIALRYVKKSHFTMDLASTVPIGQIYQIMTGKPTKSEVFGFLIMLRLWRLRRVGKLFARYVHKRKQEQTQ 1870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00848 1870 PANTHER ZINC FINGER FYVE DOMAIN PROTEIN 15 1681 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 1070 1098 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 916 930 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 1260 1281 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 875 893 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 1083 1098 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 866 893 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 908 930 - -
Spst9g00848 1870 SUPERFAMILY Voltage-gated potassium channels 1727 1860 - -
Spst9g00848 1870 MobiDBLite consensus disorder prediction 1260 1278 - -
Spst9g00848 1870 Pfam Ion transport protein 1733 1859 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g00848 1870 Gene3D - 1733 1867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00848 Spst-Chr9 7443135 7472221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00848 1687 1859 Ion Channels AT4G32650 57.955 2.76e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00848 K19027 - gmx:100813647 3004.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00848 9 7443135 7472221 Spst9g00848 9 7443135 7472221 ECH