Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00837 ATGGGAGAAAAGTCTTGTATGAACCAACGTGCAACCTTACACGTTCCAGTCTCCAATGCTCACGAAAAACTATTTTCTGAGAAGCCGGAAGAAGTAGATCCCTACAATCAGGAAGAACTAGATTCCAGCAACAAGAAAGAGTTAGATTCCAAGAATCAGGAAGAATTAGATTCCAAGAATCAGGAAGAACTAGATTCCAAGAATCAGGAAGAACTAGATTCCAAGAATCAGGTGGAACTAGGTACCGAGAATTACGAGGAGCTAGATCCCAATAATCACGAAGAAGGAGATTTCAAGAATCAGGATGAAGTAGATTACAAGTCCCAGGAAGAAAATGGTTTCATGAATGACGAAGAAAATGGTTACTTGAATGACGAAGAAAATGATGCCAAGAATCACGAGGAAAATGATTCTCAGAATAACGAAGAAAAAGATACCAAGAAAAAGTATCAACCTCAGTTCGATACAAACCTTCAACTTCTCGAGGCTCAGATCAAAACCCTTACTGAGTCTTTGCGAATACTGCAGACTGGCTACGCATTTTGGCTTTCACCGTCGCATATGAAGAACAAAGTTTACAAGAATCATGAAGAAAAAGATATAAAGAACAAATATTTACCTCAGTCCGCTCAGAGCCTTATTGAACATCATATTAAAAACCTGACCGAGTCTTTGCGTGAAATGCATCCCGACGAACTATCTTGGCGTTCATCGCCGCAGAATATGAAGAACAAAGTTTCCAATAATCATAAAGAAAACGATTTTAAGAAAAAGCCTTTGCCTCTGTCCGAGCAGCACCTTATTGAAAATCATATTAAAAACCTGTCTGATTCATTGGGTGGAGTTCTGCCCAAACAACCATCTTGGCTTTCATCGCCGCAGAGTATGAAAGACTTGGCTGAGGTAGAAACTGAGATGGATATTGAATATCTAAAGGAGTCATTTCCTGATATTGCTGAACAATCCCTCAGAGATATATACCTTGCCAACGATTGTGATCTGGGAAATTCTGTTGACATGATCAGCGATCTTGAGTCGAAAGATATTCAAGTTCTTTGTGGAAAAAGAAACATGGGTGTGGATTACTACGATGTATTGAAGGTTGACAGAAATGCTACGGATGATGATTTGAAGAAAGCATACAGAAAGTTGGCCATGAAATGGCACCCTGATAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAACAAATCTCTGAGGCTTACGAGGTACTGAGTGACCCTCAGAAAAGGGTGGTTTACGATAAGTATGGAGAGGAGGGGTTGAAAGATAAGCCACCTGATGAACCATCAAATGGGTTCAATCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGCATCATCTGGGCCAGGTAGGTCCAAGAGATTCCCCTCTGACGGAGGGGCAGCAACATTTGGTGGATTTAGTAATAATTTTCGATCAAATAGTAGTACTGGACGGGGGAATGTGCCGAAGAAGCCACTACCTGTGGAATCCAAACTGCCATGCTCTCTGGAGGAATTATACACGGGATCTACAAGGAAAATGAAGATCTCAAGGAAGGTTTTGGATGCTAACGGACGGACAGTTCCGGAAACAGAGATCTTAACCATTGATGTGAAGCCGGGTTGGAAAAAAGGGACAAAGATTACGTTCCCAGACAAAGGGAATCAGGAACCAAATCAACTGGCAGCAGACCTTGTGTTTGTGATTGATGAGAAGCCACATGATATGTTCAAGAGAGATGGGAATGACCTTATTGTGAGCAAAAGGGTATCATTGGCAGAGGCCATTGGAGGAACCACAATAAACCTAAGCACGCTTGATGGACGTAGTTTAAGTGTTCCAGTGAGTGACATTGTGAGTCCTGGTTACGAGATGATTGTTGCAAATGAAGGGATGCCAGTAGCAAAGGAACGTGGTCAAAGGGGTGATTTGAGGATCAAATTTGATGTCAGTTTTCCAACAAAGTTAACCCCAGAGCAACGAGCAGGACTCAAGCAAGCACTCACAACTTGA 2052 0.4167 MGEKSCMNQRATLHVPVSNAHEKLFSEKPEEVDPYNQEELDSSNKKELDSKNQEELDSKNQEELDSKNQEELDSKNQVELGTENYEELDPNNHEEGDFKNQDEVDYKSQEENGFMNDEENGYLNDEENDAKNHEENDSQNNEEKDTKKKYQPQFDTNLQLLEAQIKTLTESLRILQTGYAFWLSPSHMKNKVYKNHEEKDIKNKYLPQSAQSLIEHHIKNLTESLREMHPDELSWRSSPQNMKNKVSNNHKENDFKKKPLPLSEQHLIENHIKNLSDSLGGVLPKQPSWLSSPQSMKDLAEVETEMDIEYLKESFPDIAEQSLRDIYLANDCDLGNSVDMISDLESKDIQVLCGKRNMGVDYYDVLKVDRNATDDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKQISEAYEVLSDPQKRVVYDKYGEEGLKDKPPDEPSNGFNPRNAEDIFAEFFGSSPFGFASSGPGRSKRFPSDGGAATFGGFSNNFRSNSSTGRGNVPKKPLPVESKLPCSLEELYTGSTRKMKISRKVLDANGRTVPETEILTIDVKPGWKKGTKITFPDKGNQEPNQLAADLVFVIDEKPHDMFKRDGNDLIVSKRVSLAEAIGGTTINLSTLDGRSLSVPVSDIVSPGYEMIVANEGMPVAKERGQRGDLRIKFDVSFPTKLTPEQRAGLKQALTT 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00837 683 SMART dnaj_3 360 419 IPR001623 -
Spst9g00837 683 MobiDBLite consensus disorder prediction 427 446 - -
Spst9g00837 683 Coils Coil 116 143 - -
Spst9g00837 683 MobiDBLite consensus disorder prediction 232 257 - -
Spst9g00837 683 CDD DnaJ_C 508 669 - -
Spst9g00837 683 Gene3D DnaJ domain 359 466 IPR036869 -
Spst9g00837 683 ProSitePatterns Nt-dnaJ domain signature. 404 423 IPR018253 -
Spst9g00837 683 Gene3D - 586 683 - -
Spst9g00837 683 MobiDBLite consensus disorder prediction 485 500 - -
Spst9g00837 683 MobiDBLite consensus disorder prediction 125 150 - -
Spst9g00837 683 MobiDBLite consensus disorder prediction 21 114 - -
Spst9g00837 683 CDD CUE_CID7_like 306 347 IPR041806 -
Spst9g00837 683 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 358 681 - -
Spst9g00837 683 Pfam DnaJ domain 361 424 IPR001623 -
Spst9g00837 683 MobiDBLite consensus disorder prediction 485 507 - -
Spst9g00837 683 ProSiteProfiles dnaJ domain profile. 361 427 IPR001623 -
Spst9g00837 683 Coils Coil 158 178 - -
Spst9g00837 683 MobiDBLite consensus disorder prediction 1 150 - -
Spst9g00837 683 CDD DnaJ 361 416 IPR001623 -
Spst9g00837 683 FunFam DNAJ heat shock family protein 586 681 - -
Spst9g00837 683 SUPERFAMILY HSP40/DnaJ peptide-binding domain 589 675 IPR008971 GO:0006457|GO:0051082
Spst9g00837 683 Gene3D - 507 585 - -
Spst9g00837 683 ProSiteProfiles CUE domain profile. 303 346 IPR003892 GO:0043130
Spst9g00837 683 FunFam Dnaj homolog subfamily b member 504 585 - -
Spst9g00837 683 PRINTS DnaJ domain signature 399 419 IPR001623 -
Spst9g00837 683 PRINTS DnaJ domain signature 363 381 IPR001623 -
Spst9g00837 683 PRINTS DnaJ domain signature 381 396 IPR001623 -
Spst9g00837 683 PRINTS DnaJ domain signature 419 438 IPR001623 -
Spst9g00837 683 Pfam DnaJ C terminal domain 508 666 IPR002939 -
Spst9g00837 683 SUPERFAMILY Chaperone J-domain 360 464 IPR036869 -
Spst9g00837 683 SUPERFAMILY HSP40/DnaJ peptide-binding domain 508 588 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00837 Spst-Chr9 7304058 7308644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00837 362 469 C2H2 Transcription Factor Family AT1G74250 31.250 5.54e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00837 K09510 - gmx:100796426 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00837 9 7304058 7308644 Spst9g00837 9 7304058 7308644 ECH