Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00836 ATGTGTCAGATTGTTGCCTCAATTGTTGTTCTATCTTTGTCCAAACATGAGCATCCACATGCCCCCTTGTTTGCTTGGGTTATTGGGTATGCCTCCGGGTGCGTATCCACCCTCCCTCTACTCTATTGGCGTTACTACCATAATAATTATTGTCTTTTGGAGCATAATACTTCAGGGACGCTTCTTTCCGATTCTGTGACGAATGGTGGGGAAGATGTGATAGAATATTCCAGAAGCAATCAAGATTCATCATGGTTGATGAATGCAAGAGAGGATATGTCACAAACTCGAGGTGCAACCTCTGAATCGATCAATGCTCTTCCAACTTATAAGTTTCAAGTGAACAAAAATAAAGGCAAAGAGGAAAACAATTTGGTTGTTAGTGAATGTGGAGCTGTAGCTGTAGGAACAGAAAAGGAACGTATAATCTTTGGAGAAGATGCAGTTTGTTGTATTTGCTTGACAAACTATGAACACGATGATGAGTTGAGAGAATTACCTTGTTCGCATCTTTTTCACAAAGATTGTGTTGATAAGTGGTTGAAGATAAATGCTTTATGTCCTCTTTGCAAGAGTGAGATATGTGAGAACGTAACTGAACCAATTTTTGAGGAAAATGCCAACCAACAACACGGTCAAAACAGAGTTGAGACGCCGCTCATACGTATCACTTCCATTCACTTTATCGCAACATTGCTTCGACAAGAGCCGATATCCAGTATGCAAATGGCTCAGTTGGAGCCGCTTATGAATAAGGTTGATTCGTCAGGCAGACAGATGGAAATGGGGATTTTGGGTCCCATGCCCAGTGATATTGTGTCACAGCCGATGGGAACCTCAAATGAACATGTTGGATTATTGAGATCTGTTCCTGGAGAACCTATGTGTCAGGGCATGCCCCTTTCGAGCATGCAGAGTGGGCGAGTAGAAACGCAAGCGAGTAATCCAGGAATGCATCAAATTCTTTCCCCTAACAGACAGTCCATGCAAATGGGGAGGCTTCAGAATAGCACAGGTCCACAGCAGCAGCAGCCAACAACTACCAAGCGCAAGGCACCGATGGAACTATCATCCAGTAGTTCTTTTAACAAGCGGGTTGCACAAATTGGAAATAGACCTTGGTTGCAGCAAGTACCTAATCCATCCAATAGAGGTTCTCTGCAGGTGCAATCTCTGTCAACTGCCTCCAGGACACAGCATTCAGCAGCTTCTAGTAAGAGAAAAACACAGTTTGATAGCACTTCCAGTAAAGCTGGGACACCTCGGTCGGTGAATTCTAAAAGTCAGAATACACAGATAAAGCAGTCCTCCAAAGTTCAAACTGAATCATCTGATAGTGTCAGGTCCAAGATGAGAGAGTCATTGGCTGCTGCTCTGGCCTTGGTTTCTCAGCAAGGTAAACCTCAGCTCCCAAACAATAATACACCAACTAATAATGCTGCCAATACTGAAGGTAATTTAGAGAACAGCTCTCAATGTTCTGGATCAACACCTACATCCATCAATGCTCCACCGGAGCAAAGGCAGAATATTTCTCAATCTGTTAATTCCTCTTTTGCTGAGGCTGATTCAGTTGGCCATGTGGTGAGAGAGCACATGCAGAGTGCATCATTCAATGAAGATTTTCCAGAAAACTACAAGGAATATGAAGCAGGATCCACAGATGCATCAAACAATGAAAGCATACTGACATCCATGCAAGTCTTGAACTGTGATAAGCAAGATTACCAATCATGTTACACTTTGACTACTGATGATGTTCCTTTTAGTGACAGTTTCTTTATGAAAGATGATCTTTTGCAGGGAAATGGTCTTTCCTGGGTATTATCTGATATGGTGGACGTGGGAAATCAAAAGGAAAGTCAAAATAATATAGAGCAGAGGTCAGAACCTGAAGAAACTGGTGGAGGTTGTAGGGAGGAGGCCCCTCTACCTGAACTTTTGGCAACAAAAATAGAAGCAGAACTCTTCAAATTGTTTGGAGGCGTTAATAAGAAGTACAAAGAGAAAGGGAGGTCCCTTTTATTTAATTTAAAAGATCGCAATAACCCTGAACTGAGAGAAAGGGTTATGTTCGGTCAAATTCCTCCTGAACAATTATGTTCCATGAATGCAGAGGAACTTGCTTCAAAGGAGCTCTCTCAGTGGCGTATAGCCAAAGCTGAGGAGCTGGCTCAAATGGTGGTTTTACCTGATTCAGATATTGATTTTAGGCGTTTGGTCAAGAAGACTCATAAAGGTGAATTTCAAGTGGAAGTTGAACATGAAGACAATGTATCCGTGGAGGAGGTTTCAGGTGGCAAAACCTCAGTTGCTCGAAGTCAATCAGCAAAAAAGGATGTGGAGGGCACTTCTTCCAAACCTGATGTGAACATTGATACCGAGAAGGGCAATTTACAGAAGGATGATACATTTTCCATTACCATCTCTTCCCATGATGGAACTGATCCCATGCAGGGACTTATGACTGATGATGCATTGAAGGACCCTGACTTTCTTCCACCAATTGTCTCTCTTGATGAATTCATGGAATCTCTTAGTTCAGAACCACCATTTGAAAATTTACCGCCAGAATCTGGGAAAGTCACACCTACCTTAGACAAGGATGAATCTGGGGTTGGATCCAAATCAAAATCTAAGCCATCTGATTTAACTCCAAACGGGCAAGCTGTTGTCACTCCTGATGAGTCTGACAAGTTTCAAAGCACATGTGTAAATCCAGATGCTGAAAAGGAGAAAAGGGCTAATGCTGAATCTGGGGCCATTTCTTCTGAAACGGGAAACAGTGGGAGTCAAGGTGACATGAAGTCAATTGATGGTCGTACCAAAGAAAGGTCAATTGATGATGTGAAGCCTGCTTCCAGCGATACTGAGTTGAAAGGCAATCAGTTTCATGCAGAAGGGAGATTCGGTAATGAAAATAGGTATTTAAAGGATGCAGTTCTCACGAAGGGTGAATGCCTCTGGGAAGGGATGCTTCAACCAAATATCTCTACCACTCAGTCAGTCATAAGCTTCTTTAAAAGTGGCGAGAAAACTGCTGCTAAAGACTGGCCTGGGTTTCTCGAGATCAAGGGAAGGGTTCGGTTAGATGCATTTGAGAAATTTCTACAGGATCTTCGACTGTCCAGGAGCCGTGCAATCATGGTGTCACATTTCCTTTGCAAAGAGTCGGACGAGCAATCAACTCTCCGTGAGGTGGCTGACTCGTATATTTCGGACGAAAGAGTAGGATTTGCTGAGCCTGTGCACGGAGTAGAACTTTACTTTTGCCCGCCTCATAAGAAAACAGTTGAAATGCTCAGCAACATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGTCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAACTTCGTCTATATCACCCACCACTGCATCACACCACAAACATAGCTCTAAAAGACTATACTTCAGTAGGAGACAGCAAGATATAAATGTGAATACCAATTCTACCCATAAAGCAGTGCCCTCTACGGGCTTTAAGACCACTGTGAATGAGAATGATGACGAAGATGATGTACCTCCTGGATTTGGGCCATCGGCTGCCCGAGTCGAGGATGACCTACCGGAGTTTAATTTCTCTGGCAGTTCGGTTCCAACACCCTTGGCCCAAAAACCAAAGGCACCATCGAATATGGTTACATTACACTCAGTTAACCCTGTTCCACCACCACCACGACCTGTAGAACAAATGAGGGAACTTGTATACAAATATGGGCAAAACAAACCAAGTGCACCTTCAGTAAATTGGCAGGATAAATTTGGGGGGACAATTCAACCGTGGAATGATGATGATGATGACATTCCTGAATGGCAGCCCCAAACCTCCCAGAATCAGCTTCCTCCCCAACAGACAATGCACAACTTCCATCTTCGACCGCACATTTTGAATCAATCATTTCCGGGTTCACAACAACAGCCAATTATGACACCACAATATCTGCAACCCCCGATGAATGTGACGCATAGCCAACGAAATTTTGACTCTCAGTGGGTTCCTTCTCCCCAGGGTAGCAGCCTACAGCCAAGAGGTGGACCGCCCTACGGAGCGCCTGCGCAAGGCGCTACCTGGTCTCAAAATGTGTCTAGAAGTAGGGGATATTAG 4149 0.4343 MCQIVASIVVLSLSKHEHPHAPLFAWVIGYASGCVSTLPLLYWRYYHNNYCLLEHNTSGTLLSDSVTNGGEDVIEYSRSNQDSSWLMNAREDMSQTRGATSESINALPTYKFQVNKNKGKEENNLVVSECGAVAVGTEKERIIFGEDAVCCICLTNYEHDDELRELPCSHLFHKDCVDKWLKINALCPLCKSEICENVTEPIFEENANQQHGQNRVETPLIRITSIHFIATLLRQEPISSMQMAQLEPLMNKVDSSGRQMEMGILGPMPSDIVSQPMGTSNEHVGLLRSVPGEPMCQGMPLSSMQSGRVETQASNPGMHQILSPNRQSMQMGRLQNSTGPQQQQPTTTKRKAPMELSSSSSFNKRVAQIGNRPWLQQVPNPSNRGSLQVQSLSTASRTQHSAASSKRKTQFDSTSSKAGTPRSVNSKSQNTQIKQSSKVQTESSDSVRSKMRESLAAALALVSQQGKPQLPNNNTPTNNAANTEGNLENSSQCSGSTPTSINAPPEQRQNISQSVNSSFAEADSVGHVVREHMQSASFNEDFPENYKEYEAGSTDASNNESILTSMQVLNCDKQDYQSCYTLTTDDVPFSDSFFMKDDLLQGNGLSWVLSDMVDVGNQKESQNNIEQRSEPEETGGGCREEAPLPELLATKIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGQIPPEQLCSMNAEELASKELSQWRIAKAEELAQMVVLPDSDIDFRRLVKKTHKGEFQVEVEHEDNVSVEEVSGGKTSVARSQSAKKDVEGTSSKPDVNIDTEKGNLQKDDTFSITISSHDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLSSEPPFENLPPESGKVTPTLDKDESGVGSKSKSKPSDLTPNGQAVVTPDESDKFQSTCVNPDAEKEKRANAESGAISSETGNSGSQGDMKSIDGRTKERSIDDVKPASSDTELKGNQFHAEGRFGNENRYLKDAVLTKGECLWEGMLQPNISTTQSVISFFKSGEKTAAKDWPGFLEIKGRVRLDAFEKFLQDLRLSRSRAIMVSHFLCKESDEQSTLREVADSYISDERVGFAEPVHGVELYFCPPHKKTVEMLSNILPKEQIEAVNSIDNGLIGIIVWRKTNLTSSISPTTASHHKHSSKRLYFSRRQQDINVNTNSTHKAVPSTGFKTTVNENDDEDDVPPGFGPSAARVEDDLPEFNFSGSSVPTPLAQKPKAPSNMVTLHSVNPVPPPPRPVEQMRELVYKYGQNKPSAPSVNWQDKFGGTIQPWNDDDDDIPEWQPQTSQNQLPPQQTMHNFHLRPHILNQSFPGSQQQPIMTPQYLQPPMNVTHSQRNFDSQWVPSPQGSSLQPRGGPPYGAPAQGATWSQNVSRSRGY 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00836 1382 MobiDBLite consensus disorder prediction 801 817 - -
Spst9g00836 1382 SMART ring_2 150 190 IPR001841 -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 299 367 - -
Spst9g00836 1382 Pfam Transcription factor S-II (TFIIS), central domain 627 724 IPR003618 GO:0006351
Spst9g00836 1382 MobiDBLite consensus disorder prediction 282 451 - -
Spst9g00836 1382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 196 IPR013083 -
Spst9g00836 1382 SUPERFAMILY Elongation factor TFIIS domain 2 645 712 IPR036575 GO:0006351
Spst9g00836 1382 MobiDBLite consensus disorder prediction 1332 1356 - -
Spst9g00836 1382 CDD SPOC_TFIIS 988 1126 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 760 827 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 1164 1178 - -
Spst9g00836 1382 Gene3D - 619 711 IPR036575 GO:0006351
Spst9g00836 1382 MobiDBLite consensus disorder prediction 618 639 - -
Spst9g00836 1382 SUPERFAMILY RING/U-box 140 197 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 877 904 - -
Spst9g00836 1382 SMART mid_6 599 719 IPR003618 GO:0006351
Spst9g00836 1382 MobiDBLite consensus disorder prediction 763 779 - -
Spst9g00836 1382 Pfam SPOC domain 984 1126 IPR012921 -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 1164 1224 - -
Spst9g00836 1382 ProSiteProfiles TFIIS central domain profile. 620 736 IPR003618 GO:0006351
Spst9g00836 1382 MobiDBLite consensus disorder prediction 1332 1382 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 919 936 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 937 955 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 1368 1382 - -
Spst9g00836 1382 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 342 1211 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 373 444 - -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 465 516 - -
Spst9g00836 1382 ProSiteProfiles Zinc finger RING-type profile. 150 191 IPR001841 -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 839 958 - -
Spst9g00836 1382 Pfam Ring finger domain 150 191 IPR001841 -
Spst9g00836 1382 MobiDBLite consensus disorder prediction 464 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00836 Spst-Chr9 7291471 7302888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00836 3 49 C3H Transcription Factor Family AT1G80400 65.957 2.42e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00836 - - vum:124825671 1935.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00836 9 7291471 7302888 Spst9g00836 9 7291471 7302888 ECH