Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g00836 | ATGTGTCAGATTGTTGCCTCAATTGTTGTTCTATCTTTGTCCAAACATGAGCATCCACATGCCCCCTTGTTTGCTTGGGTTATTGGGTATGCCTCCGGGTGCGTATCCACCCTCCCTCTACTCTATTGGCGTTACTACCATAATAATTATTGTCTTTTGGAGCATAATACTTCAGGGACGCTTCTTTCCGATTCTGTGACGAATGGTGGGGAAGATGTGATAGAATATTCCAGAAGCAATCAAGATTCATCATGGTTGATGAATGCAAGAGAGGATATGTCACAAACTCGAGGTGCAACCTCTGAATCGATCAATGCTCTTCCAACTTATAAGTTTCAAGTGAACAAAAATAAAGGCAAAGAGGAAAACAATTTGGTTGTTAGTGAATGTGGAGCTGTAGCTGTAGGAACAGAAAAGGAACGTATAATCTTTGGAGAAGATGCAGTTTGTTGTATTTGCTTGACAAACTATGAACACGATGATGAGTTGAGAGAATTACCTTGTTCGCATCTTTTTCACAAAGATTGTGTTGATAAGTGGTTGAAGATAAATGCTTTATGTCCTCTTTGCAAGAGTGAGATATGTGAGAACGTAACTGAACCAATTTTTGAGGAAAATGCCAACCAACAACACGGTCAAAACAGAGTTGAGACGCCGCTCATACGTATCACTTCCATTCACTTTATCGCAACATTGCTTCGACAAGAGCCGATATCCAGTATGCAAATGGCTCAGTTGGAGCCGCTTATGAATAAGGTTGATTCGTCAGGCAGACAGATGGAAATGGGGATTTTGGGTCCCATGCCCAGTGATATTGTGTCACAGCCGATGGGAACCTCAAATGAACATGTTGGATTATTGAGATCTGTTCCTGGAGAACCTATGTGTCAGGGCATGCCCCTTTCGAGCATGCAGAGTGGGCGAGTAGAAACGCAAGCGAGTAATCCAGGAATGCATCAAATTCTTTCCCCTAACAGACAGTCCATGCAAATGGGGAGGCTTCAGAATAGCACAGGTCCACAGCAGCAGCAGCCAACAACTACCAAGCGCAAGGCACCGATGGAACTATCATCCAGTAGTTCTTTTAACAAGCGGGTTGCACAAATTGGAAATAGACCTTGGTTGCAGCAAGTACCTAATCCATCCAATAGAGGTTCTCTGCAGGTGCAATCTCTGTCAACTGCCTCCAGGACACAGCATTCAGCAGCTTCTAGTAAGAGAAAAACACAGTTTGATAGCACTTCCAGTAAAGCTGGGACACCTCGGTCGGTGAATTCTAAAAGTCAGAATACACAGATAAAGCAGTCCTCCAAAGTTCAAACTGAATCATCTGATAGTGTCAGGTCCAAGATGAGAGAGTCATTGGCTGCTGCTCTGGCCTTGGTTTCTCAGCAAGGTAAACCTCAGCTCCCAAACAATAATACACCAACTAATAATGCTGCCAATACTGAAGGTAATTTAGAGAACAGCTCTCAATGTTCTGGATCAACACCTACATCCATCAATGCTCCACCGGAGCAAAGGCAGAATATTTCTCAATCTGTTAATTCCTCTTTTGCTGAGGCTGATTCAGTTGGCCATGTGGTGAGAGAGCACATGCAGAGTGCATCATTCAATGAAGATTTTCCAGAAAACTACAAGGAATATGAAGCAGGATCCACAGATGCATCAAACAATGAAAGCATACTGACATCCATGCAAGTCTTGAACTGTGATAAGCAAGATTACCAATCATGTTACACTTTGACTACTGATGATGTTCCTTTTAGTGACAGTTTCTTTATGAAAGATGATCTTTTGCAGGGAAATGGTCTTTCCTGGGTATTATCTGATATGGTGGACGTGGGAAATCAAAAGGAAAGTCAAAATAATATAGAGCAGAGGTCAGAACCTGAAGAAACTGGTGGAGGTTGTAGGGAGGAGGCCCCTCTACCTGAACTTTTGGCAACAAAAATAGAAGCAGAACTCTTCAAATTGTTTGGAGGCGTTAATAAGAAGTACAAAGAGAAAGGGAGGTCCCTTTTATTTAATTTAAAAGATCGCAATAACCCTGAACTGAGAGAAAGGGTTATGTTCGGTCAAATTCCTCCTGAACAATTATGTTCCATGAATGCAGAGGAACTTGCTTCAAAGGAGCTCTCTCAGTGGCGTATAGCCAAAGCTGAGGAGCTGGCTCAAATGGTGGTTTTACCTGATTCAGATATTGATTTTAGGCGTTTGGTCAAGAAGACTCATAAAGGTGAATTTCAAGTGGAAGTTGAACATGAAGACAATGTATCCGTGGAGGAGGTTTCAGGTGGCAAAACCTCAGTTGCTCGAAGTCAATCAGCAAAAAAGGATGTGGAGGGCACTTCTTCCAAACCTGATGTGAACATTGATACCGAGAAGGGCAATTTACAGAAGGATGATACATTTTCCATTACCATCTCTTCCCATGATGGAACTGATCCCATGCAGGGACTTATGACTGATGATGCATTGAAGGACCCTGACTTTCTTCCACCAATTGTCTCTCTTGATGAATTCATGGAATCTCTTAGTTCAGAACCACCATTTGAAAATTTACCGCCAGAATCTGGGAAAGTCACACCTACCTTAGACAAGGATGAATCTGGGGTTGGATCCAAATCAAAATCTAAGCCATCTGATTTAACTCCAAACGGGCAAGCTGTTGTCACTCCTGATGAGTCTGACAAGTTTCAAAGCACATGTGTAAATCCAGATGCTGAAAAGGAGAAAAGGGCTAATGCTGAATCTGGGGCCATTTCTTCTGAAACGGGAAACAGTGGGAGTCAAGGTGACATGAAGTCAATTGATGGTCGTACCAAAGAAAGGTCAATTGATGATGTGAAGCCTGCTTCCAGCGATACTGAGTTGAAAGGCAATCAGTTTCATGCAGAAGGGAGATTCGGTAATGAAAATAGGTATTTAAAGGATGCAGTTCTCACGAAGGGTGAATGCCTCTGGGAAGGGATGCTTCAACCAAATATCTCTACCACTCAGTCAGTCATAAGCTTCTTTAAAAGTGGCGAGAAAACTGCTGCTAAAGACTGGCCTGGGTTTCTCGAGATCAAGGGAAGGGTTCGGTTAGATGCATTTGAGAAATTTCTACAGGATCTTCGACTGTCCAGGAGCCGTGCAATCATGGTGTCACATTTCCTTTGCAAAGAGTCGGACGAGCAATCAACTCTCCGTGAGGTGGCTGACTCGTATATTTCGGACGAAAGAGTAGGATTTGCTGAGCCTGTGCACGGAGTAGAACTTTACTTTTGCCCGCCTCATAAGAAAACAGTTGAAATGCTCAGCAACATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGTCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAACTTCGTCTATATCACCCACCACTGCATCACACCACAAACATAGCTCTAAAAGACTATACTTCAGTAGGAGACAGCAAGATATAAATGTGAATACCAATTCTACCCATAAAGCAGTGCCCTCTACGGGCTTTAAGACCACTGTGAATGAGAATGATGACGAAGATGATGTACCTCCTGGATTTGGGCCATCGGCTGCCCGAGTCGAGGATGACCTACCGGAGTTTAATTTCTCTGGCAGTTCGGTTCCAACACCCTTGGCCCAAAAACCAAAGGCACCATCGAATATGGTTACATTACACTCAGTTAACCCTGTTCCACCACCACCACGACCTGTAGAACAAATGAGGGAACTTGTATACAAATATGGGCAAAACAAACCAAGTGCACCTTCAGTAAATTGGCAGGATAAATTTGGGGGGACAATTCAACCGTGGAATGATGATGATGATGACATTCCTGAATGGCAGCCCCAAACCTCCCAGAATCAGCTTCCTCCCCAACAGACAATGCACAACTTCCATCTTCGACCGCACATTTTGAATCAATCATTTCCGGGTTCACAACAACAGCCAATTATGACACCACAATATCTGCAACCCCCGATGAATGTGACGCATAGCCAACGAAATTTTGACTCTCAGTGGGTTCCTTCTCCCCAGGGTAGCAGCCTACAGCCAAGAGGTGGACCGCCCTACGGAGCGCCTGCGCAAGGCGCTACCTGGTCTCAAAATGTGTCTAGAAGTAGGGGATATTAG | 4149 | 0.4343 | MCQIVASIVVLSLSKHEHPHAPLFAWVIGYASGCVSTLPLLYWRYYHNNYCLLEHNTSGTLLSDSVTNGGEDVIEYSRSNQDSSWLMNAREDMSQTRGATSESINALPTYKFQVNKNKGKEENNLVVSECGAVAVGTEKERIIFGEDAVCCICLTNYEHDDELRELPCSHLFHKDCVDKWLKINALCPLCKSEICENVTEPIFEENANQQHGQNRVETPLIRITSIHFIATLLRQEPISSMQMAQLEPLMNKVDSSGRQMEMGILGPMPSDIVSQPMGTSNEHVGLLRSVPGEPMCQGMPLSSMQSGRVETQASNPGMHQILSPNRQSMQMGRLQNSTGPQQQQPTTTKRKAPMELSSSSSFNKRVAQIGNRPWLQQVPNPSNRGSLQVQSLSTASRTQHSAASSKRKTQFDSTSSKAGTPRSVNSKSQNTQIKQSSKVQTESSDSVRSKMRESLAAALALVSQQGKPQLPNNNTPTNNAANTEGNLENSSQCSGSTPTSINAPPEQRQNISQSVNSSFAEADSVGHVVREHMQSASFNEDFPENYKEYEAGSTDASNNESILTSMQVLNCDKQDYQSCYTLTTDDVPFSDSFFMKDDLLQGNGLSWVLSDMVDVGNQKESQNNIEQRSEPEETGGGCREEAPLPELLATKIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGQIPPEQLCSMNAEELASKELSQWRIAKAEELAQMVVLPDSDIDFRRLVKKTHKGEFQVEVEHEDNVSVEEVSGGKTSVARSQSAKKDVEGTSSKPDVNIDTEKGNLQKDDTFSITISSHDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLSSEPPFENLPPESGKVTPTLDKDESGVGSKSKSKPSDLTPNGQAVVTPDESDKFQSTCVNPDAEKEKRANAESGAISSETGNSGSQGDMKSIDGRTKERSIDDVKPASSDTELKGNQFHAEGRFGNENRYLKDAVLTKGECLWEGMLQPNISTTQSVISFFKSGEKTAAKDWPGFLEIKGRVRLDAFEKFLQDLRLSRSRAIMVSHFLCKESDEQSTLREVADSYISDERVGFAEPVHGVELYFCPPHKKTVEMLSNILPKEQIEAVNSIDNGLIGIIVWRKTNLTSSISPTTASHHKHSSKRLYFSRRQQDINVNTNSTHKAVPSTGFKTTVNENDDEDDVPPGFGPSAARVEDDLPEFNFSGSSVPTPLAQKPKAPSNMVTLHSVNPVPPPPRPVEQMRELVYKYGQNKPSAPSVNWQDKFGGTIQPWNDDDDDIPEWQPQTSQNQLPPQQTMHNFHLRPHILNQSFPGSQQQPIMTPQYLQPPMNVTHSQRNFDSQWVPSPQGSSLQPRGGPPYGAPAQGATWSQNVSRSRGY | 1382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 801 | 817 | - | - | |
Spst9g00836 | 1382 | SMART | ring_2 | 150 | 190 | IPR001841 | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 299 | 367 | - | - | |
Spst9g00836 | 1382 | Pfam | Transcription factor S-II (TFIIS), central domain | 627 | 724 | IPR003618 | GO:0006351 | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 282 | 451 | - | - | |
Spst9g00836 | 1382 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 196 | IPR013083 | - | |
Spst9g00836 | 1382 | SUPERFAMILY | Elongation factor TFIIS domain 2 | 645 | 712 | IPR036575 | GO:0006351 | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 1332 | 1356 | - | - | |
Spst9g00836 | 1382 | CDD | SPOC_TFIIS | 988 | 1126 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 760 | 827 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 1164 | 1178 | - | - | |
Spst9g00836 | 1382 | Gene3D | - | 619 | 711 | IPR036575 | GO:0006351 | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 618 | 639 | - | - | |
Spst9g00836 | 1382 | SUPERFAMILY | RING/U-box | 140 | 197 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 877 | 904 | - | - | |
Spst9g00836 | 1382 | SMART | mid_6 | 599 | 719 | IPR003618 | GO:0006351 | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 763 | 779 | - | - | |
Spst9g00836 | 1382 | Pfam | SPOC domain | 984 | 1126 | IPR012921 | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 1164 | 1224 | - | - | |
Spst9g00836 | 1382 | ProSiteProfiles | TFIIS central domain profile. | 620 | 736 | IPR003618 | GO:0006351 | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 1332 | 1382 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 919 | 936 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 937 | 955 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 1368 | 1382 | - | - | |
Spst9g00836 | 1382 | PANTHER | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN | 342 | 1211 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 373 | 444 | - | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 465 | 516 | - | - | |
Spst9g00836 | 1382 | ProSiteProfiles | Zinc finger RING-type profile. | 150 | 191 | IPR001841 | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 839 | 958 | - | - | |
Spst9g00836 | 1382 | Pfam | Ring finger domain | 150 | 191 | IPR001841 | - | |
Spst9g00836 | 1382 | MobiDBLite | consensus disorder prediction | 464 | 516 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g00836 | Spst-Chr9 | 7291471 | 7302888 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g00836 | 3 | 49 | C3H Transcription Factor Family | AT1G80400 | 65.957 | 2.42e-15 | 78.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g00836 | - | - | vum:124825671 | 1935.61 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst9g00836 | 9 | 7291471 | 7302888 | Spst9g00836 | 9 | 7291471 | 7302888 | ECH |