Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00834 ATGAATAAAGTAAATAAAATTAGTGCCAAAGACGAAGAACGTGCAATCCGGATCACCAGAGCAAAGGCTAGAGCCTTGAGAGAAATTCCTCCCGCTTCAAGACCCTCCTTTGAAAATGAACAGCAAAAAGTGCCTAGAGCAAATTCCAAAAGAGCAGCCACTTCTGAAGACCAAACTTCTGTGGTTGTTCCTGCTGCTCTTCAAAACAAGAGAAGGGCAGTTCTTACAGATGTAACAAACATTTGTCTAAAATCACGTGATAAGTGTACTAAGGCATCCAAATTTCTGGCCAAAGGAGTTTCTACAAAGAAAAGCACAAAGTTAACTTCAGGTGTTTCCTCTGAAGTTTCATCAAGACAGGAGAATGTTAGAGCAAAGTTAGTTGAAGATTTATCAACAATAAGGACGGTAGAATGCAATGATGCCATAAGAGAACGTGTTACCGCAGATGCCAAGTCTTCAATGCAAGATTCTGTGAAATCTGATGAACTTCTGTGCTCTTCAGAAAAAGACGTATACAGGATTTGTGAGAAGCCAGAAACCTCAAACTCCCTTGCTATTGTGGACATTGATTCAGAGTTAAAGGATCCTCAAATTTGGAGTTCTTATGCCTCCGACATATACAACATCATTCGAGTCACAGAGCTTAAAAGGAAACCATTGACCAATTATATGGACAAGTTGCAGACAGATATTAATCCAAGCATGCGTGGAATTCTGGTAGATTGGCTTGTGGAGGTATCCGAGGAGTACAGATTGGTTCCAGACGCTCTTTACCTGACAGTGAACCTCATTGATCGGTATCTCTCAACTACATTCATTCAGAAGCAAAGGCTACAGTTGCTGGGTGTTACTTGCATGCTCATTGCATCAAAGTATGAAGAGATGTGCCCACCTAGAGTGGAAGATTTTTGCTTCATCACAGATAACACATACACAAAAGAACAGGTAGTAAAAATGGAGAGAGAAGTACTGAATGTGATGAATTTTCAGTTATCTGTTCCCACAATCAAAACATTTCTAAGGAGATTTATCCAAGCAGCACAATCTTCTTACAAGGCTCCTCGTGTTGAACTGGAATTCTTGGCAAATTATTTAGCAGAGCTTGCTCTTGTTGAATACAGATTCTTCCAGTTTCTTCCTTCCATTGTAGCTGCATCTGCTGTGTTCCTTGGCAGATGGACCCTGAACGATTCAGAACATCCATGGAATCCAACTCTGGAGCACTATACAAACTACAAAGCTTCAGACCTCAAAACAGTTGTTCTTGCTCTGCAAGATCTGCAACTTAATTCCAAAGGCTGCCCCCTCAATGCTGTCCGCGATAAGTATAAGCTACAGAAGTTATATAAGGAGAAAGGCAGAGAAGAGCACAGTACAGATTTTGTAAATAGGCTTATACAGAAAATGTTTGATCCACTGCATGATCCTTCTTATCACTTATCAGAAGGAGGCAGTTAA 1461 0.4052 MNKVNKISAKDEERAIRITRAKARALREIPPASRPSFENEQQKVPRANSKRAATSEDQTSVVVPAALQNKRRAVLTDVTNICLKSRDKCTKASKFLAKGVSTKKSTKLTSGVSSEVSSRQENVRAKLVEDLSTIRTVECNDAIRERVTADAKSSMQDSVKSDELLCSSEKDVYRICEKPETSNSLAIVDIDSELKDPQIWSSYASDIYNIIRVTELKRKPLTNYMDKLQTDINPSMRGILVDWLVEVSEEYRLVPDALYLTVNLIDRYLSTTFIQKQRLQLLGVTCMLIASKYEEMCPPRVEDFCFITDNTYTKEQVVKMEREVLNVMNFQLSVPTIKTFLRRFIQAAQSSYKAPRVELEFLANYLAELALVEYRFFQFLPSIVAASAVFLGRWTLNDSEHPWNPTLEHYTNYKASDLKTVVLALQDLQLNSKGCPLNAVRDKYKLQKLYKEKGREEHSTDFVNRLIQKMFDPLHDPSYHLSEGGS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00834 486 Gene3D - 206 449 - -
Spst9g00834 486 PIRSF Cyclin_A_B_D_E 7 454 IPR046965 GO:0016538|GO:0044772
Spst9g00834 486 MobiDBLite consensus disorder prediction 26 57 - -
Spst9g00834 486 Pfam Cyclin, N-terminal domain 206 333 IPR006671 -
Spst9g00834 486 SMART Cyclin_C_2 335 461 IPR004367 -
Spst9g00834 486 SMART cyclin_7 242 326 IPR013763 -
Spst9g00834 486 SMART cyclin_7 339 427 IPR013763 -
Spst9g00834 486 MobiDBLite consensus disorder prediction 35 57 - -
Spst9g00834 486 CDD CYCLIN_AtCycA-like_rpt2 335 448 - -
Spst9g00834 486 PANTHER CYCLINS 158 445 IPR039361 -
Spst9g00834 486 FunFam Mitotic cyclin 6 220 320 - -
Spst9g00834 486 SUPERFAMILY Cyclin-like 195 332 IPR036915 -
Spst9g00834 486 FunFam Cyclin A1 322 452 - -
Spst9g00834 486 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
Spst9g00834 486 Pfam Cyclin, C-terminal domain 335 449 IPR004367 -
Spst9g00834 486 Gene3D - 220 333 - -
Spst9g00834 486 SUPERFAMILY Cyclin-like 334 449 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00834 Spst-Chr9 7279335 7284833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00834 8 449 Core Cell Cycle Gene Families AT5G25380 49.548 8.98e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00834 K06627 - gmx:547780 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00834 9 7279335 7284833 Spst9g00834 9 7279335 7284833 ECH
Spst8g01604 8 18482572 18498510 Spst9g00834 9 7279335 7284833 PCT