Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00818 ATGGCTAAGCTTCATCCTTCCAACTCCTCCCATCGCCTTATCCTCTCCGCCCTCCTCTTCTCCACTCTCTTCATCCACTACTCTCTAGCTGACGTTGGGAATGCTGCCCGATATGGCCCTCCCTACTTGCCCACTGCATGTTTCGGTAGAGACGTGTCACAGTTTCCGTCAAGTAACCTGTTTGGTGCGGCGGGGGAGGGTTTATGGGACAATGGTGCCGCATGTGGGAGACAGTATAAGGTGCGGTGCATCAGCGCTGCGGTTCCTAAAACTTGCATTCCTGGGCAGATGGTTGAGATCAAGATCGTTGATCGAGCGCAATCATCGGTTTCTAGGCCTTCCCTACGGGGAACTACCTTGGTCCTCTCTTCCAAGGCCTTCCAGGCCATCGCCAACGCTTCTGCATCGTTCATCAACATAGAATACCAGCAGTAA 435 0.5333 MAKLHPSNSSHRLILSALLFSTLFIHYSLADVGNAARYGPPYLPTACFGRDVSQFPSSNLFGAAGEGLWDNGAACGRQYKVRCISAAVPKTCIPGQMVEIKIVDRAQSSVSRPSLRGTTLVLSSKAFQAIANASASFINIEYQQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00818 144 CDD DPBB_EG45-like 31 143 - -
Spst9g00818 144 Pfam Lytic transglycolase 67 142 IPR009009 -
Spst9g00818 144 Gene3D - 30 144 IPR036908 -
Spst9g00818 144 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 33 144 IPR007112 -
Spst9g00818 144 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 12 143 - -
Spst9g00818 144 SUPERFAMILY Barwin-like endoglucanases 18 144 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00818 Spst-Chr9 7108926 7109447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00818 48 144 Expansin Gene Family AT4G17030 31.731 6.49e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00818 - - gmx:100803494 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00818 9 7108926 7109447 Spst9g00818 9 7108926 7109447 ECH