Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00801 ATGGCTGCGGCTTTTCACTATTTATCGTGTACTCGGACTGACCCTTTCCTCACACCAGCTCAATCCCTCACTCTTCCTTTCCAACGCAAACCATTTTTTTGCTCTCTTCTTCCTGTTTCCTCTCGCGCTCGTAACCTCTCTTCTTCAATCGTCGTCGCTTCTTCCAAAAAAAAGAAAAACAAGAAAAAACTGTCTCGTGATCATGTTACTGAGGGCGGCGAGGAGGATGTCGACGCGTTTGAGCTTCTCTTCAAGCAACTCGAAGAAGATCTCAAAAGCGGTGATTTGTCAGATGATGATGGCGAAGATGAAATAAGTGAAGAAGAGATGGCATTGCTTGAACGTGAGTTGGAAAATGCCCTGGGGGACTTTGATACTGAATTGTTGAATTCGGATGTAATCGACATAGAAATTGGTAGTGATCCAGAGAATGAGGATGAGGATGAGGATGGTGAGGATGATGGTGGTGAGGATGGTGGTGAAGATGGAGATGAAAAGTCACTGAACCTTAAGAATTGGCAGATGAAGAAATTGGCTAGAGCTTTGAAAGCTGGCCGCCGCAAAACAAGTATAAAAAATCTTGCTGCCGATCTTTGTCTTGACAGGGCTCTTGTTCTTCAATTACTTCGTGACCCTCCTCCAAATCTTTTAATGATGAGTCTAACTGTACCTGATGAACCCACAACAACAGTAGTATCACTTGAAACTAAGCCCAGCGAGATTCTCCTTAAAGAAACAAGTATTGATGACGCTGAATCTGAATCAGAACCCAAAGCTCAAGTACCTGTTCATACCTTGCAACGTAATTGGTATGCTCAAAAGCGATTGAAAAAGGCCCATGTTTACACTCTGGAGAGAGTTTATAGGAGATCAAAACGACCTACTAATGCAATGATCAGCAGCATTGTGCATGTAACAAACATTCCTCGAAAAAGAGTTGTGAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGAGTTCCAGATCACCGTCTTCCTTACCAGCGCTCTCCGGTGAGAGGAAAACAGGAAGCAACCGAAGAAGCCAATGTAGTGACTGAGCCGAAGCTCAAAAGTCAGAGCTTAAGCGGCTTCGGAAGGCACCGGGAAAGGGTTCATCCGGTAAACACTTCCTCTGTGAAGATGGAAGCAAGTGCGGGAATGGTCGCTGGCTCGCACAAACGGAACGAGCTCGTTCGGATTCGCCACGATTCTTCTGATAGCGGGTCTAAACCCTTGAAGAGCTTGAATGGGCAAATCTGTCAAATATGTGGTGATACTGTTGGATTGACTGCGACTGGTGATGTCTTTGTTGCTTGTAATGAGTGTGCCTTCCCTGTGTGTCGCCCTTGTTATGAATACGAGCGAAAGGATGGGAACCAGTCTTGTCCACAATGCAAGACTAGATACAAGAGGCATAGAGGGAGTCCTCGAGTCGAGGGAGATGAAGATGAAGATAACTCTGATGACATAGAGAATGAGTTCAATTATGCACAAGGAAAAGCCAAGGCCAGGCGGCAGTGGGAGGAAGATCCTGACCTATCATCGTCTTCTAGACGTGAATCTCAACAGCCAATTCCCCTCCTCACCAATGGCCAAACGATGTCTGGTGAGATTCCGTGTGCCACACCTGACACTCAATCTGTACGAACTACTTCAGGTCCTTTGGGCCCATCTGAAAAGGTTCACTCACTCCCCTATATTGATCCAAGGCAACCAGTTCCTGTAAGAATTGTCGACCCATCAAAGGACTTAAATTCTTATGGTCTGGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGTTGGAAGCTCAAGCAGGAGAAAAATATGGTACAAATGACTGGTAGATATGCTGAGGGGAAAGGAGGAGATGTTGAAGGGACTGGTTCTAATGGAGAAGAACTTCAAATGGTTGATGATGCTCGACAACCCATGAGTCGTGTGGTGCCAATTCCTTCATCTCAGCTGACTCCTTATCGTGTTGTTATCATACTCCGTCTTATTATTCTTGGCTTCTTCTTACAATATCGTGTAACTCACCCTGTGAAAGATGCATACCCACTGTGGTTGACATCCGTTATTTGTGAGATTTGGTTTGCCTTATCCTGGATACTGGATCAGTTTCCAAAATGGTCTCCTATTAACCGGGAGACTTATCTTGAACGACTTGCTTTAAGATATGATCGTGAAGGAGAGCCATCACAGTTAGATCCTGTTGATGTGTTCGTTAGTACAGTGGATCCCCTCAAAGAGCCACCTCTAGTAACTGCAAACACTGTGTTGTCTATTCTTTCTGTTGACTACCCTGTGGACAAAGTTTCTTGCTACGTATCAGATGATGGTTCAGCTATGTTGACCTTTGAAGCACTATCAGAAACAGCTGAGTTTGCAAAGAAATGGGTGCCCTTCTGCAAAAAGCACAATATTGAGCCAAGAGCCCCGGAGTTTTATTTTGCCCAGAAGATTGATTACTTGAAGGACAAGATTCAACCTTCCTTTGTAAAGGAGCGACGAGCAATGAAGAGGGAATATGAAGAATTCAAAGTACGGATCAATGCCCTGGTAGCCAAAGCTCAGAAGATGCCAGAGGAAGGTTGGACAATGCAGGATGGAACTCCTTGGCCTGGAAATAATCCTAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGTCTGGATACAGATGGAAATGAGCTGCCTAGACTTGTTTATGTTTCTCGTGAGAAGCGGCCAGGCTTCCAACATCACAAGAAGGCTGGAGCTATGAACGCATTGATTCGTGTTTCTGCTGTCTTGACCAATGGAGCATATCTTCTGAATGTGGATTGTGATCACTATTTCAATAATAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTCTTGGAAAGAAGACATGTTATGTGCAATTTCCTCAGAGATTTGATGGCATCGACTTGCACGATCGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAAGGTCAGGATGGTGTTCAGGGTCCAGTCTATGTGGGAACTGGTTGTTGTTTCAACAGGCAGGCTTTGTATGGTTATGATCCTGTTCTGACTGAGGAGGATTTGGAACCTAATATTATTGTAAAGAGTTGTTGGGGTTCTAGAAAGAAGGGAAGGGGTGGCAATAAGAAGTACATTGACAAGAAGAGAGCAATGAATAGAACTGAATCTACTGTTCCCATATTTAATATGGAAGACATAGAAGAGGGTGTTGAAGGTTATGACGATGAAAGGTCACTGCTTATGTCCCAAAAGAGCTTGGAGAAGCGTTTTGGTCAATCTCCAGTTTTTATTGCTGCCACTTTCATGGAGCAGGGTGGCATTCCACCCTCAACAAACCCTGCAACTCTTCTTAAGGAAGCAATCCATGTTATCAGCTGTGGTTATGAAGACAAGACTGAATGGGGCAAAGAGATTGGATGGATTTATGGTTCTGTGACGGAAGATATCTTAACTGGGTTTAAGATGCATGCTCGTGGTTGGATTTCCATCTATTGCATGCCACCTCGCCCAGCATTTAAGGGTTCTGCTCCAATCAATCTTTCAGATCGTCTCAATCAGGTGCTTCGGTGGGCATTGGGTTCAATTGAGATTTTTCTAAGCAGGCATTGTCCCTTGTGGTATGGCTACAATGGAAGGTTGAAGCCTCTGATGAGACTTGCTTATATTAACACCATTGTCTACCCCTTTACCTCAATCCCACTGATTGCTTACTGTACGCTACCTGCATTTTGTCTCCTCACAAATAAATTTATTATTCCTGAGATAAGCAACTTTGCCAGCATGTGGTTCATTCTCCTCTTCGTGTCCATTTTTACTACTTCAATTCTTGAGCTTAGGTGGAGTGGGGTCAGTATAGAAGATTGGTGGAGAAATGAACAATTCTGGGTTATCGGTGGGACATCTGCACATCTTTTTGCTGTGTTCCAGGGGCTTCTAAAAGTGCTTGCTGGGATCGATACAAATTTTACTGTTACATCAAAGGCATCAGATGAGGACGGTGATTTTGCCGAGCTTTATGTGTTTAAATGGACATCACTTCTCATCCCTCCTACAACGGTGCTTATTGTGAATTTGGTAGGGATTGTGGCTGGTGTGTCCTATGCCATAAACAGTGGTTACCAGTCTTGGGGTCCACTATTTGGCAAGCTGTTCTTTGCTATCTGGGTCATTGCCCATTTATACCCATTCTTGAAGGGTCTCTTGGGCAGGCAAAATCGTACCCCAACCATTGTTATTGTTTGGTCCGTTCTTCTTGCTTCAATATTCTCCTTGCTGTGGGTGAGGATTGATCCCTTCACCACTGACTCCAACAAAGTATCCAATGGTCAATGTGGCATCAACTGTTAG 4395 0.4416 MAAAFHYLSCTRTDPFLTPAQSLTLPFQRKPFFCSLLPVSSRARNLSSSIVVASSKKKKNKKKLSRDHVTEGGEEDVDAFELLFKQLEEDLKSGDLSDDDGEDEISEEEMALLERELENALGDFDTELLNSDVIDIEIGSDPENEDEDEDGEDDGGEDGGEDGDEKSLNLKNWQMKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLRDPPPNLLMMSLTVPDEPTTTVVSLETKPSEILLKETSIDDAESESEPKAQVPVHTLQRNWYAQKRLKKAHVYTLERVYRRSKRPTNAMISSIVHVTNIPRKRVVKWFEDKRAEEGVPDHRLPYQRSPVRGKQEATEEANVVTEPKLKSQSLSGFGRHRERVHPVNTSSVKMEASAGMVAGSHKRNELVRIRHDSSDSGSKPLKSLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHRGSPRVEGDEDEDNSDDIENEFNYAQGKAKARRQWEEDPDLSSSSRRESQQPIPLLTNGQTMSGEIPCATPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMVQMTGRYAEGKGGDVEGTGSNGEELQMVDDARQPMSRVVPIPSSQLTPYRVVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWILDQFPKWSPINRETYLERLALRYDREGEPSQLDPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVLGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGGNKKYIDKKRAMNRTESTVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKPLMRLAYINTIVYPFTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRIDPFTTDSNKVSNGQCGINC 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00801 1464 ProSiteProfiles 'Homeobox' domain profile. 267 327 IPR001356 GO:0003677
Spst9g00801 1464 MobiDBLite consensus disorder prediction 137 170 - -
Spst9g00801 1464 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 896 1038 IPR029044 -
Spst9g00801 1464 Coils Coil 836 856 - -
Spst9g00801 1464 SUPERFAMILY RING/U-box 405 492 - -
Spst9g00801 1464 Coils Coil 103 123 - -
Spst9g00801 1464 MobiDBLite consensus disorder prediction 502 516 - -
Spst9g00801 1464 SMART HOX_1 273 331 IPR001356 GO:0003677
Spst9g00801 1464 MobiDBLite consensus disorder prediction 517 557 - -
Spst9g00801 1464 CDD homeodomain 273 322 IPR001356 GO:0003677
Spst9g00801 1464 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 642 1431 - -
Spst9g00801 1464 MobiDBLite consensus disorder prediction 328 350 - -
Spst9g00801 1464 CDD mRING-HC-C4C4_CesA 418 468 - -
Spst9g00801 1464 MobiDBLite consensus disorder prediction 455 567 - -
Spst9g00801 1464 SUPERFAMILY Nucleotide-diphospho-sugar transferases 756 1038 IPR029044 -
Spst9g00801 1464 ProSiteProfiles Zinc finger RING-type profile. 420 466 IPR001841 -
Spst9g00801 1464 Pfam Zinc-binding RING-finger 410 486 IPR027934 -
Spst9g00801 1464 FunFam Cellulose synthase 855 1029 - -
Spst9g00801 1464 MobiDBLite consensus disorder prediction 328 366 - -
Spst9g00801 1464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 402 493 IPR013083 -
Spst9g00801 1464 SUPERFAMILY Homeodomain-like 269 327 IPR009057 -
Spst9g00801 1464 Gene3D - 271 327 - -
Spst9g00801 1464 FunFam Cellulose synthase 402 493 - -
Spst9g00801 1464 Pfam Cellulose synthase 738 1454 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g00801 1464 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00801 Spst-Chr9 6905126 6917786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00801 381 1461 Glycosyltransferase AT4G32410 87.800 0.0 1944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Spst9g00801 Cellulose_synt 0 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00801 K10999 - gmx:100810567 2189.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00801 9 6905126 6917786 Spst9g00801 9 6905126 6917786 ECH