Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst9g00791 | ATGCAAAACAAAATGCCTGAGCTGCTACATGGGACTCTTAAGGTAACCATTTTTGAAGTTGATAGACTGCATACTGGATGTCATTTGGATTTCTGTCAGCAGGGCACAACACACAAGGGTAAGAGATTTCTAGCCCAAGTCAAGGGTTGTCTGCTGTGCCGGCCTGAGATTGTCGGGACGAGATTGTATGCAACAGTTGATTTAGACAAGGCAAGGGTTGGGCGAACTAGAATGATAGGAAACCAACCTTCTCACCCAAAGTGGAATGAAAGCTTTGAAATCTACTGTGCCCATCAAATCTCAAACATCATATTCACTGTCAAAGATGGTAACCCAATTGGAGCAACTCTAATTGGAAGAGCCTATGTCCCTGCAGAGCAAGTTCGCAAGGGCCCCATAGTTAAGAGGTGGGTTGAGATATTGGACGAAGATCGTCGTCCCGTGCCAGGTCACTCCAAAATCTGTGTCAGCATGCAATTCTATAGCGTCACGCAGGACACAACATGCTCATGGTCTCAGGGAATTCGCATGCCATTTTTTGGAGTTCCTCGTACATTTTTCAGCCAGAGAGAAGGTTGTCATGTTACTTTGTACCAAGATGCTCATGCACCACGTGGCGTTGGTGTCGTCCCATATATTCCAATATCCGATGAAAAGGACTACTTGCCTGCAAGATGTTGGGAGGACATTTACACTGCCATTATGGACGCAAAGTACTTTGTTTACATAGCTGGTTGGTCTGTTTACACTGAAATAGCATTAGTTAGAGACAAAGAGGAATCAAATATCAACCTCGGGGAGTTACTTAAGAAGAAGGCTGATGAAGGTGTTAAAGTTCTTTTGCTTATTTGGAATGATAGAACTTCTGTACCGGAATTTACGAAAGATGGCTTGATGGCAACTCATGATCAGGAAACTGCTGCTTACTTTAGAAACACAAAGGTGCATTGTGTTTTGTGTCCACGGAACCCGGATGATGGGAAAAGCATAATTCAAGGCCTTCAAATATCAACTATGTTCACTCATCACCAAAAGAGTGTGGTTGTTGATGCAGGTGTTGTAGGGTCATCAAAGAAGCGAAGCGTCATAAGTTTCATCGGTGGCCTTGATCTTTGTGATGGGAGGTATGATACTAGGGATCATCCTCTGTTTTCGAGTTTGAATACAGTGCATAGAAATGACTTCCACCAACCAAACTTCCCAAATGCTTCTATTGATAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGTCCTATTGCTTGGGATGTTTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTTGGGAAGGAACTGTTATTCTCACCCGATTACCTTGATCACATTCTAGTCCACCCATATGATGCACAAAAATCAGAAGTGGGAGAAGAAGACACGTGGAATGTTCAGTTGTTTAGATCCATTGACGGTAGTACTGCTTTTGGCTTCCCCCAAGCCCCAGATGTTGTTGCTTCATTGGGACTTGTTAGTGGGAAAGACAATGTCATTGAGAGAAGTATTCAGGATGCCTACATTAATGCTATCAGGCGTGCAAAAAACTTCATCTACATTGAGAACCAATACTTCATAGGGAGTTCATATGGTTGGCAAGCAACTGATGGCATTGTGATTGAAGACATATGTGCTTTGCATCTTATACCAAAGGAGTTGACATTGAAGATTGTAAGCAAGATTGAAGCAAAAGAGAGGTTTTCTGTGTACATAGTGATCCCAATGTGGCCTGAAGGTGTACCTGAAAGTGACTCGGTTCAAGCAATATTAGATTGGCAGAGAAGAACCATTGAGATGATGTATTCCGACATTGCTAATGCCTTAGTAAAAGTGGGCATTCAAGCACGCCCTCGTGATTATTTGACATTTTTTTGCCTTGGCAAGAGGGAGCATAAGCAACCCGGGGAGTATACTCCTCCACAGGAACCAGAGCCTGATAGTGACTACAGAAGAGCACAAAATTCAAGGAGGTTCATGATATATGTTCATTCCAAAATGATGATAGTTGATGACGAGTACATAATCGTGGGCTCTGCTAACATAAACCAAAGATCAATGGACGGTTCAAGAGACAGTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATGGAATCGGAGACCCAGAGGGGAGATATACAGATTCCGACGTGCATTATGGTATGAGCACCTTGGGGATCATGGTTTTGACTCAAAAATCTTGGACAATCCAGAGCATCTGGACTGCATCGATCTTGTGAATAGGCTTGCGGAGGACAACTGGGACATGTACTCAAAGGAAACATTTGATGAAATCAGACCATTTCACCACCTCATGCGCTACCCCATCCATGTAGCCGATGACGGAGCCATTACAACTCTTCCGGGCTTTCAATATTTTCCTGACACCAAGGCTCCAATTTTGGGTTGCTATTCAAAATTCCTCCCTTCAATTCTCACCACCTAA | 2481 | 0.4345 | MQNKMPELLHGTLKVTIFEVDRLHTGCHLDFCQQGTTHKGKRFLAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSHPKWNESFEIYCAHQISNIIFTVKDGNPIGATLIGRAYVPAEQVRKGPIVKRWVEILDEDRRPVPGHSKICVSMQFYSVTQDTTCSWSQGIRMPFFGVPRTFFSQREGCHVTLYQDAHAPRGVGVVPYIPISDEKDYLPARCWEDIYTAIMDAKYFVYIAGWSVYTEIALVRDKEESNINLGELLKKKADEGVKVLLLIWNDRTSVPEFTKDGLMATHDQETAAYFRNTKVHCVLCPRNPDDGKSIIQGLQISTMFTHHQKSVVVDAGVVGSSKKRSVISFIGGLDLCDGRYDTRDHPLFSSLNTVHRNDFHQPNFPNASIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKELLFSPDYLDHILVHPYDAQKSEVGEEDTWNVQLFRSIDGSTAFGFPQAPDVVASLGLVSGKDNVIERSIQDAYINAIRRAKNFIYIENQYFIGSSYGWQATDGIVIEDICALHLIPKELTLKIVSKIEAKERFSVYIVIPMWPEGVPESDSVQAILDWQRRTIEMMYSDIANALVKVGIQARPRDYLTFFCLGKREHKQPGEYTPPQEPEPDSDYRRAQNSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGSRDSEIAMGAFQPRHLAWNRRPRGEIYRFRRALWYEHLGDHGFDSKILDNPEHLDCIDLVNRLAEDNWDMYSKETFDEIRPFHHLMRYPIHVADDGAITTLPGFQYFPDTKAPILGCYSKFLPSILTT | 826 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst9g00791 | 826 | SMART | pld_4 | 668 | 695 | IPR001736 | GO:0003824 | |
| Spst9g00791 | 826 | SMART | pld_4 | 338 | 375 | IPR001736 | GO:0003824 | |
| Spst9g00791 | 826 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 162 | IPR035892 | - | |
| Spst9g00791 | 826 | Gene3D | C2 domain | 10 | 170 | IPR035892 | - | |
| Spst9g00791 | 826 | Pfam | Phospholipase D Active site motif | 338 | 375 | IPR001736 | GO:0003824 | |
| Spst9g00791 | 826 | Pfam | Phospholipase D Active site motif | 669 | 695 | IPR001736 | GO:0003824 | |
| Spst9g00791 | 826 | CDD | C2_plant_PLD | 8 | 161 | - | - | |
| Spst9g00791 | 826 | ProSiteProfiles | C2 domain profile. | 1 | 138 | IPR000008 | - | |
| Spst9g00791 | 826 | PANTHER | PHOSPHOLIPASE D | 8 | 814 | IPR015679 | - | |
| Spst9g00791 | 826 | SUPERFAMILY | Phospholipase D/nuclease | 509 | 736 | - | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst9g00791 | K01115 | - | gmx:100794115 | 1438.71 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst9g00791 | 9 | 6816877 | 6820097 | Spst4g02413 | 4 | 64568525 | 64572099 | ECH | |
| Spst9g00791 | 9 | 6816877 | 6820097 | Spst5g00095 | 5 | 964004 | 968883 | ECH | |
| Spst9g00791 | 9 | 6816877 | 6820097 | Spst9g00792 | 9 | 6822621 | 6826079 | ECH | |
| Spst9g00791 | 9 | 6816877 | 6820097 | Spst9g00791 | 9 | 6816877 | 6820097 | ECH |
Showing 1 to 4 of 4 entries