Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00791 ATGCAAAACAAAATGCCTGAGCTGCTACATGGGACTCTTAAGGTAACCATTTTTGAAGTTGATAGACTGCATACTGGATGTCATTTGGATTTCTGTCAGCAGGGCACAACACACAAGGGTAAGAGATTTCTAGCCCAAGTCAAGGGTTGTCTGCTGTGCCGGCCTGAGATTGTCGGGACGAGATTGTATGCAACAGTTGATTTAGACAAGGCAAGGGTTGGGCGAACTAGAATGATAGGAAACCAACCTTCTCACCCAAAGTGGAATGAAAGCTTTGAAATCTACTGTGCCCATCAAATCTCAAACATCATATTCACTGTCAAAGATGGTAACCCAATTGGAGCAACTCTAATTGGAAGAGCCTATGTCCCTGCAGAGCAAGTTCGCAAGGGCCCCATAGTTAAGAGGTGGGTTGAGATATTGGACGAAGATCGTCGTCCCGTGCCAGGTCACTCCAAAATCTGTGTCAGCATGCAATTCTATAGCGTCACGCAGGACACAACATGCTCATGGTCTCAGGGAATTCGCATGCCATTTTTTGGAGTTCCTCGTACATTTTTCAGCCAGAGAGAAGGTTGTCATGTTACTTTGTACCAAGATGCTCATGCACCACGTGGCGTTGGTGTCGTCCCATATATTCCAATATCCGATGAAAAGGACTACTTGCCTGCAAGATGTTGGGAGGACATTTACACTGCCATTATGGACGCAAAGTACTTTGTTTACATAGCTGGTTGGTCTGTTTACACTGAAATAGCATTAGTTAGAGACAAAGAGGAATCAAATATCAACCTCGGGGAGTTACTTAAGAAGAAGGCTGATGAAGGTGTTAAAGTTCTTTTGCTTATTTGGAATGATAGAACTTCTGTACCGGAATTTACGAAAGATGGCTTGATGGCAACTCATGATCAGGAAACTGCTGCTTACTTTAGAAACACAAAGGTGCATTGTGTTTTGTGTCCACGGAACCCGGATGATGGGAAAAGCATAATTCAAGGCCTTCAAATATCAACTATGTTCACTCATCACCAAAAGAGTGTGGTTGTTGATGCAGGTGTTGTAGGGTCATCAAAGAAGCGAAGCGTCATAAGTTTCATCGGTGGCCTTGATCTTTGTGATGGGAGGTATGATACTAGGGATCATCCTCTGTTTTCGAGTTTGAATACAGTGCATAGAAATGACTTCCACCAACCAAACTTCCCAAATGCTTCTATTGATAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGTCCTATTGCTTGGGATGTTTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTTGGGAAGGAACTGTTATTCTCACCCGATTACCTTGATCACATTCTAGTCCACCCATATGATGCACAAAAATCAGAAGTGGGAGAAGAAGACACGTGGAATGTTCAGTTGTTTAGATCCATTGACGGTAGTACTGCTTTTGGCTTCCCCCAAGCCCCAGATGTTGTTGCTTCATTGGGACTTGTTAGTGGGAAAGACAATGTCATTGAGAGAAGTATTCAGGATGCCTACATTAATGCTATCAGGCGTGCAAAAAACTTCATCTACATTGAGAACCAATACTTCATAGGGAGTTCATATGGTTGGCAAGCAACTGATGGCATTGTGATTGAAGACATATGTGCTTTGCATCTTATACCAAAGGAGTTGACATTGAAGATTGTAAGCAAGATTGAAGCAAAAGAGAGGTTTTCTGTGTACATAGTGATCCCAATGTGGCCTGAAGGTGTACCTGAAAGTGACTCGGTTCAAGCAATATTAGATTGGCAGAGAAGAACCATTGAGATGATGTATTCCGACATTGCTAATGCCTTAGTAAAAGTGGGCATTCAAGCACGCCCTCGTGATTATTTGACATTTTTTTGCCTTGGCAAGAGGGAGCATAAGCAACCCGGGGAGTATACTCCTCCACAGGAACCAGAGCCTGATAGTGACTACAGAAGAGCACAAAATTCAAGGAGGTTCATGATATATGTTCATTCCAAAATGATGATAGTTGATGACGAGTACATAATCGTGGGCTCTGCTAACATAAACCAAAGATCAATGGACGGTTCAAGAGACAGTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATGGAATCGGAGACCCAGAGGGGAGATATACAGATTCCGACGTGCATTATGGTATGAGCACCTTGGGGATCATGGTTTTGACTCAAAAATCTTGGACAATCCAGAGCATCTGGACTGCATCGATCTTGTGAATAGGCTTGCGGAGGACAACTGGGACATGTACTCAAAGGAAACATTTGATGAAATCAGACCATTTCACCACCTCATGCGCTACCCCATCCATGTAGCCGATGACGGAGCCATTACAACTCTTCCGGGCTTTCAATATTTTCCTGACACCAAGGCTCCAATTTTGGGTTGCTATTCAAAATTCCTCCCTTCAATTCTCACCACCTAA 2481 0.4345 MQNKMPELLHGTLKVTIFEVDRLHTGCHLDFCQQGTTHKGKRFLAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSHPKWNESFEIYCAHQISNIIFTVKDGNPIGATLIGRAYVPAEQVRKGPIVKRWVEILDEDRRPVPGHSKICVSMQFYSVTQDTTCSWSQGIRMPFFGVPRTFFSQREGCHVTLYQDAHAPRGVGVVPYIPISDEKDYLPARCWEDIYTAIMDAKYFVYIAGWSVYTEIALVRDKEESNINLGELLKKKADEGVKVLLLIWNDRTSVPEFTKDGLMATHDQETAAYFRNTKVHCVLCPRNPDDGKSIIQGLQISTMFTHHQKSVVVDAGVVGSSKKRSVISFIGGLDLCDGRYDTRDHPLFSSLNTVHRNDFHQPNFPNASIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKELLFSPDYLDHILVHPYDAQKSEVGEEDTWNVQLFRSIDGSTAFGFPQAPDVVASLGLVSGKDNVIERSIQDAYINAIRRAKNFIYIENQYFIGSSYGWQATDGIVIEDICALHLIPKELTLKIVSKIEAKERFSVYIVIPMWPEGVPESDSVQAILDWQRRTIEMMYSDIANALVKVGIQARPRDYLTFFCLGKREHKQPGEYTPPQEPEPDSDYRRAQNSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGSRDSEIAMGAFQPRHLAWNRRPRGEIYRFRRALWYEHLGDHGFDSKILDNPEHLDCIDLVNRLAEDNWDMYSKETFDEIRPFHHLMRYPIHVADDGAITTLPGFQYFPDTKAPILGCYSKFLPSILTT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00791 826 SMART pld_4 668 695 IPR001736 GO:0003824
Spst9g00791 826 SMART pld_4 338 375 IPR001736 GO:0003824
Spst9g00791 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 162 IPR035892 -
Spst9g00791 826 Gene3D C2 domain 10 170 IPR035892 -
Spst9g00791 826 Pfam Phospholipase D Active site motif 338 375 IPR001736 GO:0003824
Spst9g00791 826 Pfam Phospholipase D Active site motif 669 695 IPR001736 GO:0003824
Spst9g00791 826 CDD C2_plant_PLD 8 161 - -
Spst9g00791 826 ProSiteProfiles C2 domain profile. 1 138 IPR000008 -
Spst9g00791 826 PANTHER PHOSPHOLIPASE D 8 814 IPR015679 -
Spst9g00791 826 SUPERFAMILY Phospholipase D/nuclease 509 736 - -
Spst9g00791 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Spst9g00791 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 668 695 IPR001736 GO:0003824
Spst9g00791 826 Gene3D Endonuclease Chain A 484 711 - -
Spst9g00791 826 FunFam Phospholipase D delta 217 452 - -
Spst9g00791 826 Gene3D Endonuclease Chain A 215 454 - -
Spst9g00791 826 FunFam Phospholipase D 480 714 - -
Spst9g00791 826 Pfam Phospholipase D C terminal 745 815 IPR024632 -
Spst9g00791 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 338 375 IPR001736 GO:0003824
Spst9g00791 826 SMART C2_3c 12 137 IPR000008 -
Spst9g00791 826 Pfam C2 domain 12 139 IPR000008 -
Spst9g00791 826 SUPERFAMILY Phospholipase D/nuclease 182 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00791 Spst-Chr9 6816877 6820097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00791 8 826 Phospholipase D Gene Family (Wang group) AT3G15730 62.757 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00791 K01115 - gmx:100794115 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00791 9 6816877 6820097 Spst4g02413 4 64568525 64572099 ECH
Spst9g00791 9 6816877 6820097 Spst5g00095 5 964004 968883 ECH
Spst9g00791 9 6816877 6820097 Spst9g00792 9 6822621 6826079 ECH
Spst9g00791 9 6816877 6820097 Spst9g00791 9 6816877 6820097 ECH