Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00773 ATGGCACAAGATATTGTTACTCCACCAGTTCCTTTTGATTTTGAACTCTTGGTTGATGATCCCGATCACCTTAGAACTGTCAAAGCCTCATCCAGCAGGAAAGACCCATGGATTGAACCTGAAAGGTTAAAGCTCAGACACAGGATTGGTCGAGGACCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGATGAGTATCATGAAGTTGCTGCCAAGATGTTACCTCCAATCAGAGAGGAACATATGAAGACTGCATTAGAGAAATTTTGTGAATTATATTTCAATTGTCAAGGAGTGCCTAGGGTGTGCTGGCTACTTGGGATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGATCAGTTGGTGACAAGATCGCCAGACTCAGAGAGGGAAGGATTTCATTGCCTGATGTTCTGAGGTATGGTATTGATCTCGCTCAAGGTATTCTGGAACTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATCCAATGTGCTTCTCGATGATACTGATCAAGCAATACTGGGAGATGTTGGTATTCCAAATCTTCTGTTTGGTTCCTCATTCCTAAGCTCAGATACTGCCAATAGGCTTGGTACTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTGAGGGGCCCTGTATCCTTTGAAACAGATTCATGGGGATTTGGGTGCACTATTGTGGAAATGTTGATTGGTAATCAACCTTGGTATGGGTGTCCTATTGGTGAAATATACCGATCCGTTGTTGAGAAGTATGAAAAACCCCAGATTCCTGATGGCCTTCCTTCTTTAGTTGAAAATGTCCTCAGTGGTTGCTTTGAATATGATTTGAGGAATCGCCCTTCAATGGTAGATATTTTGGCTGTCTTTAGAAGCTCGTGGAATGCAGTAGCCAATGATGGAGGATGGAGATATCTTGGAATTCAGAAGACTATAGCAAAATCAAGTAGCACTGGCTACACACAGTGGTCCCTCTCCAAGGATCATCTTCAGGTGGGTGATACAGTGCGCTCTAGAAAGCCTTCCAATTCATGCAATCCACAGAACATGGAGGTCCCAGAAGGAAATGTTGTTGGTAATGCAGATCATGGATTTGTTTTAGTGAGGCTCCATGGAGTTCATGACCCTGTAAGGATTCATGCATCGACTCTTGAACGTGTGACCAATGGTCTAGGAGCTGGGGATTGGGTGCGGATGAAAGAAGAAGATGACAAACATTCGCCGGTGGGTATTCTTCATTCTATCAATCGTGATGGCAGAGTGACTGTCGGATTTATCGGCCTACGAACTCTTTGGGAAGGAAACTCTTCAGAACTTGAAATGGCAGAATCTTACTGCGTGGGGCAGTTCATTAGGCTGAAACCCAATGTTTTAAGTCCCCGATTTGAATGGTCGCGCAAAAGGGGAGGTGGCTGGGCTACTGGTAAGATTTCTTGGATCCTACCAAATGGGTGTCTAGTTGTCAAGTTCCCAGGCATGTTGAACTTCTGGGATGCACCAAGCAGTTTCTTGGCTGATCCCTCTGAGGTTGATGTGGTTAATTTTAAAAGTTGTCCAAATATGATAGAGAAGTATCAACATGTAGAGGATCACCACTGGGCAGTAAGACCTCTTCTAATTGCATTTGGCCTTCTTACTACTGTTAAACTAGGGATGTCAATTGGAAAGAAAATTGGGAGGAACATGAATGTGAATGCAATGGAGAATCAAAGTCATTATACCGATAGCCAGAATGCTAGCAGCCCTACATCTACATGGACATCTTCAGTTGCTAACATCCTTTTCAGAGAAGGTGTTAACTTGCCCACTGGTCGCTAG 1869 0.4318 MAQDIVTPPVPFDFELLVDDPDHLRTVKASSSRKDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLPPIREEHMKTALEKFCELYFNCQGVPRVCWLLGISILNGRICIIMNFYEGSVGDKIARLREGRISLPDVLRYGIDLAQGILELHSKGILVLNLKPSNVLLDDTDQAILGDVGIPNLLFGSSFLSSDTANRLGTPNYMAPEQWQPEVRGPVSFETDSWGFGCTIVEMLIGNQPWYGCPIGEIYRSVVEKYEKPQIPDGLPSLVENVLSGCFEYDLRNRPSMVDILAVFRSSWNAVANDGGWRYLGIQKTIAKSSSTGYTQWSLSKDHLQVGDTVRSRKPSNSCNPQNMEVPEGNVVGNADHGFVLVRLHGVHDPVRIHASTLERVTNGLGAGDWVRMKEEDDKHSPVGILHSINRDGRVTVGFIGLRTLWEGNSSELEMAESYCVGQFIRLKPNVLSPRFEWSRKRGGGWATGKISWILPNGCLVVKFPGMLNFWDAPSSFLADPSEVDVVNFKSCPNMIEKYQHVEDHHWAVRPLLIAFGLLTTVKLGMSIGKKIGRNMNVNAMENQSHYTDSQNASSPTSTWTSSVANILFREGVNLPTGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00773 622 Pfam Protein tyrosine and serine/threonine kinase 43 304 IPR001245 GO:0004672|GO:0006468
Spst9g00773 622 CDD STKc_PknB_like 44 309 - -
Spst9g00773 622 ProSiteProfiles Protein kinase domain profile. 43 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00773 622 Gene3D Transferase(Phosphotransferase) domain 1 129 335 - -
Spst9g00773 622 Gene3D Phosphorylase Kinase; domain 1 19 128 - -
Spst9g00773 622 PANTHER OS06G0639500 PROTEIN 8 618 - -
Spst9g00773 622 SUPERFAMILY Protein kinase-like (PK-like) 40 305 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00773 Spst-Chr9 6649013 6651976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00773 35 314 MAP Kinase Kinase Kinase AT2G17700 25.352 1.88e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Spst9g00773 PK_Tyr_Ser-Thr 3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00773 - - gmx:100789574 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00773 9 6649013 6651976 Spst9g00773 9 6649013 6651976 ECH
Spst9g00773 9 6649013 6651976 Spst8g01541 8 16675043 16681435 ECH
Spst8g01541 8 16675043 16681435 Spst9g00773 9 6649013 6651976 PCT