Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00742 ATGGCTGAGGATAAGCTAACAAAGGGGAGAGGTTCTGGGATTTGCTTGTTGCTGATGGTAGTATCGGAATCTGATCGCGCTTGTTATGATCTTGTGTTGATGTTGGACTCCCAAGAGATGTCTAACTCTGTCATCAATGGCAATGATTCTCTCACTGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAGCCTAAACAGACTATTAGTTACATGGCAGAACGTGTTGTAGGAACTGGATCATTTGGAATTGTCTTCCAGGCAAAATGCTTGGAAACTGGGGAGGCAGTTGCAATCAAAAAGGTTTTACAAGACAGGCGATACAAGAATCGGGAATTACAGTTAATGCGGGTGATGGATCACCCAAATGTGATCACTTTGAAGCATTGTTTCTTTTCCACTACAAGTACAGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTCTTAAAACACTATAGCAATGCTAATCAAAGAATGCCCATCATCTATGTGAAACTTTATATGTACCAGATTTTCAGGGGGTTGGCATATATCCACGCTGTTCCCAAAGTTTGCCACAGAGATTTAAAGCCTCAAAATATACTGGTGGATCCTCTTACACACCAGGTGAAGCTATGTGATTTTGGAAGTGCAAAAGTTCTAGTCAAAGGTGAAGCTAATATATCATACATATGTTCACGGTTCTATCGAGCACCAGAACTTATATTTGGTGCCACTGAGTATACAAGTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGCCATTATTCCCTGGAGAAAATGCTGTAGACCAGCTGGTACATATTATAAAGGTGCTTGGCACACCCACTCGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTTCACAAAAAGATGCCTCCAGAAGCTATTGACCTTGCATCCCGGCTATTGCAATACTCCCCAAGTCTTAGATGCACTGCGCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGCCTACCAAATGGTCGTCCATTCCCCCCTCTATTTAACTTCAAACAGGAATTAACCGGAGCATCTCCTGAGCTTGTTAATAAGTTGATACCTGACCATGTGAAGCGGCAAATGGGGCTACAATTTATTCATTTGGGAGGATCGTGA 1242 0.4211 MAEDKLTKGRGSGICLLLMVVSESDRACYDLVLMLDSQEMSNSVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMDHPNVITLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKHYSNANQRMPIIYVKLYMYQIFRGLAYIHAVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELTGASPELVNKLIPDHVKRQMGLQFIHLGGS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00742 413 FunFam Shaggy-related protein kinase kappa 153 400 - -
Spst9g00742 413 CDD STKc_GSK3 68 360 IPR039192 -
Spst9g00742 413 Pfam Protein kinase domain 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00742 413 SUPERFAMILY Protein kinase-like (PK-like) 72 381 IPR011009 -
Spst9g00742 413 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00742 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Spst9g00742 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Spst9g00742 413 Gene3D Phosphorylase Kinase; domain 1 58 152 - -
Spst9g00742 413 FunFam Glycogen synthase kinase-3 beta 57 152 - -
Spst9g00742 413 SMART serkin_6 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00742 413 Gene3D Transferase(Phosphotransferase) domain 1 153 400 - -
Spst9g00742 413 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 37 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00742 Spst-Chr9 6375776 6380002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00742 77 395 MAP Kinase Gene Family AT3G59790 35.329 1.66e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Spst9g00742 Pkinase 4.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00742 K14502 - gmx:100779909 763.837