Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00737 ATGAACCTTCTTTTGGTGCTTATTCTTCTTCTGCACTACGTTGCTGCAGACCCTCCTGCTTCCTCTCCTCAACTTCCTCCTGTTTTCTCTCCGGAAGGGAAGGAGCAGCATCACCTGCATAAGAAAGTGCTAATAGCTATTGTCGTAGCCACCACTTCACTTGCAGCACTTATTTTCAGTCTCGTATGTTTCTGGGTTTATCACACCAAGTATCCAACAAAATCCAAATCCAAAAAGGTTCAAACTCCTGGTCCAGATGCAGAGAAGGGGATCACCTTAGCACCGTTTCTGAGTAAATTCAGTTCCATCAAGATTGTTGGTATGAAGGAGTCTGTGCCGATAGTTGATTATAAGCAAATAGAAAAAACGACCAATAATTTTCAGGAAAGTAACATCTTGGGCGAGGGAGGTTTTGGATGTGTTTACAAGGCTCGCTTGGATCATAACCTGGATGTTGCAGTTAAAAAACTACACTGTGAGACTCAATATGCGGAGAGAGAATTCGAGAACGAGGTGAATTTGTTAAGTAAAATTCAGCATCCGAACATAATTTCCTTACTGGGTTGCAGCATTGATGGTGTCACGAGGTTTATTGTTTATGAGTTGATGCAAAATGGATCATTGGAAGCTCAATTACATGGACCTACTCATGGCTCGGCATTGACTTGGCACATGAGGATGAAGATTGCTCTTGACACAGCTAGAGGACTAGAATATCTGCATGAGCACTGCTACCCTGCAGTGATCCATAGGGATATGAAATCTTCCAATATTCTCTTAGATGCAAACTTCAATGCAAAGCTGTCTGATTTTGGTCTAGCCATAACTGATGGGTCCCAAAGCAAGAAGAGCATTAAACTATCGGGTACCTTAGGATACGTAGCACCGGAGTATCTTCTAGATGGTAAATTAAGTGACAAAAGTGATGTGTACGCTTTTGGGGTTGTGCTATTGGAGCTCCTGTTAGGAAGGAAGCCGGTGGAAAAACTGGCACCGACTCAATGCCAGTCTATTGTCACATGGGCCATGCCACAGCTCACGGACAGATCCAAGCTTCCAAACATTGTGGATCCAGTGATTAAGAATACAATGGATCCCAAGCACTTGTACCAGGTTGCTGCTGTAGCTGTGCTGTGCGTGCAACCAGAACCTAGTTATCGTCCACTGATCACAGATGTTCTTCACTCGCTTATCCCCCTTGTTCCCATTGAGCTTGGAGGAACACTGAGAGTTTCACAAGTGAGGCAGCATGCCACTCTTGCTGTGAATTCTCGTCATTGA 1281 0.4411 MNLLLVLILLLHYVAADPPASSPQLPPVFSPEGKEQHHLHKKVLIAIVVATTSLAALIFSLVCFWVYHTKYPTKSKSKKVQTPGPDAEKGITLAPFLSKFSSIKIVGMKESVPIVDYKQIEKTTNNFQESNILGEGGFGCVYKARLDHNLDVAVKKLHCETQYAEREFENEVNLLSKIQHPNIISLLGCSIDGVTRFIVYELMQNGSLEAQLHGPTHGSALTWHMRMKIALDTARGLEYLHEHCYPAVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKSIKLSGTLGYVAPEYLLDGKLSDKSDVYAFGVVLLELLLGRKPVEKLAPTQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRVSQVRQHATLAVNSRH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00737 426 Pfam Protein tyrosine and serine/threonine kinase 130 364 IPR001245 GO:0004672|GO:0006468
Spst9g00737 426 ProSiteProfiles Protein kinase domain profile. 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00737 426 FunFam probable receptor-like protein kinase At1g80640 203 402 - -
Spst9g00737 426 Gene3D Phosphorylase Kinase; domain 1 92 202 - -
Spst9g00737 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Spst9g00737 426 FunFam Protein kinase superfamily protein 94 202 - -
Spst9g00737 426 Gene3D Transferase(Phosphotransferase) domain 1 203 402 - -
Spst9g00737 426 PANTHER OS01G0750732 PROTEIN 34 401 - -
Spst9g00737 426 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Spst9g00737 426 SMART serkin_6 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00737 426 SUPERFAMILY Protein kinase-like (PK-like) 105 397 IPR011009 -
Spst9g00737 426 CDD STKc_IRAK 133 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00737 Spst-Chr9 6337800 6340893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00737 35 401 Receptor kinase-like Gene Family AT3G58690 43.467 1.44e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Spst9g00737 PK_Tyr_Ser-Thr 6.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00737 - - gmx:100784795 719.153