Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00721 ATGGCAAAGTGTCACCGGAATAACGGCGGATCCATCGCTCTCCACCACAGCCACACCGCTAAAAATGCAACTGCTGGTGGTCACTTCCGCCTGCTTCGCCGCTTGATCATCGACGCCGTCAGCTGCGGCGGCAACTCACGCAACCGGTATCGCCAGAGCGGCGGCGATGAGGATGACGACGGAGACGGTGGCGACTTTGGCTCCGCGACGAGCCATGCAGAGAAGGAGGAGGGGTCGGGGAAGCTGTCGGATCTGTTGAACGCGGCGGAGATGAAAACGGAGGCAGAGGCGGAGGCGAAGAAGAAGGAAGAGGCATTGGCGGAGCTGAAGCGAGTGGTGAAGGAGTTGCGCGAAGAAGATTTCACGATTCGGCGAATCGCGGCCACGAAAGTGAGGTCGCTAGCGAAGGAAGATTCCGAAGCGAGAGCGAATCTCGCAATGCTCGGAGCAATTCCTCCTCTCGTGGGAATGCTCGATTCGGAAGATACTCATTCGCAAATCGCTTCGCTCTACGCTTTGCTCAATCTCGGAATCGGAAACGATGCAAATAAAGCGGCTATAGTGAAAATCGGCACTGTGCACAAAATGCTGAAGCTAATTGAATCGAGTGGTTCGGATTGGTCCGTGGCCGAAGCGATTGTTGCGAATTTTCTTGGATTGAGTGCTTTGGATTCGAATAAACCGATAATAGGATCCTCCGGGGCAATACCGTTCCTAGTTAGAACCCTAAAAAGTTTAGACGCCAGTAAAACCGCATCACAATCCCAATCGCAAGGGGAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCGATCTGTCAGAGCAACGTTTCGGTGATTTTGGAGACGGATTTGGTTTGGTTTTTATTGAGCGCGATTGGGGACATGGACGTGAGTGAGTGGAGTCTCGCCATTCTGAGCAATTTAGTGTCGACTCCGGAGGGAAGAAAAGCGATCAGTGGTGTGAGCGATGCGATTCCGGTTCTGGTGGATGTGTTAAGTTGGACGGACTCGCCAGAGTGCCAAGAGAAGGCATCGTACGTGTTGATGATTATGGCACACAAAGCGTACGGTGACAGGCGGGCCATGATCGAGGCTGGGGTTGTGTCCTCGCTGCTTGAATTGACGCTTGTGGGAACCACGTTAGCTCAGAAGCGGGCCTCGAGAATATTGGAGTGTTTGAGGGTGGATAAGGGGAAACAGATTTCTGCTAGCTACGCTGGAAACTTGAATTTGGGCGTTTCTGCTCCTATTTGTGGATCTTCTTCATCCAAGGGTGGTGCAGGAGGAGGAAAAGGGTGCTTGGTGGACGAGGAAGATGGAACGATGATGATGAGTGAAGAAAAGAAAGCGGTGAAACAGTTAGTGCAACAGAGTTTGCAGAATAACATGATTAAAATAGTGAAGAGGGCCAACTTGCGTCAGGATTTCATTCCATCTAGCCACATTGCTTCACTCACTTCGAGTTCCACTTCCAAGAGCCTCCCATTTTGA 1494 0.5167 MAKCHRNNGGSIALHHSHTAKNATAGGHFRLLRRLIIDAVSCGGNSRNRYRQSGGDEDDDGDGGDFGSATSHAEKEEGSGKLSDLLNAAEMKTEAEAEAKKKEEALAELKRVVKELREEDFTIRRIAATKVRSLAKEDSEARANLAMLGAIPPLVGMLDSEDTHSQIASLYALLNLGIGNDANKAAIVKIGTVHKMLKLIESSGSDWSVAEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLKSLDASKTASQSQSQGEQDALRALYNLSICQSNVSVILETDLVWFLLSAIGDMDVSEWSLAILSNLVSTPEGRKAISGVSDAIPVLVDVLSWTDSPECQEKASYVLMIMAHKAYGDRRAMIEAGVVSSLLELTLVGTTLAQKRASRILECLRVDKGKQISASYAGNLNLGVSAPICGSSSSKGGAGGGKGCLVDEEDGTMMMSEEKKAVKQLVQQSLQNNMIKIVKRANLRQDFIPSSHIASLTSSSTSKSLPF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00721 497 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 28 497 - -
Spst9g00721 497 Gene3D - 68 255 IPR011989 -
Spst9g00721 497 Coils Coil 85 119 - -
Spst9g00721 497 SMART arm_5 138 178 IPR000225 GO:0005515
Spst9g00721 497 SMART arm_5 312 354 IPR000225 GO:0005515
Spst9g00721 497 SMART arm_5 180 222 IPR000225 GO:0005515
Spst9g00721 497 SMART arm_5 223 272 IPR000225 GO:0005515
Spst9g00721 497 MobiDBLite consensus disorder prediction 46 83 - -
Spst9g00721 497 SUPERFAMILY ARM repeat 109 394 IPR016024 -
Spst9g00721 497 Gene3D - 256 407 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00721 Spst-Chr9 6162282 6163863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00721 124 392 U-box Gene Family AT3G46510 37.091 5.77e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00721 - - gmx:100818576 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01491 8 15103268 15105522 Spst9g00721 9 6162282 6163863 PCT