Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00711 ATGGAACCAACGTGTGTCGACACTTCTCTCAACCTCAACGTTATTCCATCTTCGCACAAAGACCTCGCGGGGGAAGTTTTGGTTGAAGAGTTGCGGCGTCTAAGTAGTGAGAACAAGAGGCTAACTGAGAGGTTGAACCAGGTGTGCGAGAACTATGTTGCTTTGCAGAAACATTTGAGTGAGTTCAACGGAATGAAGAACGCAAATTTTGACAAAGAAGGAATACCATCCATGAAAAGAAAGGTCGAAAGCGAGAACTGCGTGAATCTGTTTGGTGTCAACGCCTATACTGAGTGCAGCACCATCACTGAAGAAGAGACATTCAAAAGGCCTAAGCATAGTACCTCCCCAAACGTTTCCAAAGTTTTTGTTCGGACAGATGCATCTGATACCAGCTTATATGTAAGGGACGGATATCAGTGGAGAAAATATGGTCAAAAAGTGACGAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCTTATGCCCCAGGGTGTCCGGTGAAGAAGAAGGTGCAGAGAAGCGTGGAGGATCCAACTGTGCTGGTAACAACTTACGAAGGAGAGCACAACCATGGTGAACATCAAACGGAGATATCAGCGAATTCACCCTCAGCTTCACCCTCGTCCATGAACCCGAGTGCAGGCCCAATTGCAACGCTTGACTTCATCCCGTCAAAAGTGGTTGACATTAATGCGCAAAAGTCATCCATCCAGCAGTTTTTAGTTCAACAAATGGCTAATACTTTGACCACAGACCCTAATTTCACAGCTGCACTTGCTTCTGCCATCTCTGGAAGAATTCTAGATCATACTTCTATCTCAAACCGTTGA 837 0.454 MEPTCVDTSLNLNVIPSSHKDLAGEVLVEELRRLSSENKRLTERLNQVCENYVALQKHLSEFNGMKNANFDKEGIPSMKRKVESENCVNLFGVNAYTECSTITEEETFKRPKHSTSPNVSKVFVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPGCPVKKKVQRSVEDPTVLVTTYEGEHNHGEHQTEISANSPSASPSSMNPSAGPIATLDFIPSKVVDINAQKSSIQQFLVQQMANTLTTDPNFTAALASAISGRILDHTSISNR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00711 278 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g00711 278 MobiDBLite consensus disorder prediction 190 215 - -
Spst9g00711 278 Pfam WRKY DNA -binding domain 137 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g00711 278 Coils Coil 24 58 - -
Spst9g00711 278 ProSiteProfiles WRKY domain profile. 137 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g00711 278 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g00711 278 MobiDBLite consensus disorder prediction 198 215 - -
Spst9g00711 278 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 269 IPR044810 GO:0003700
Spst9g00711 278 FunFam WRKY transcription factor 40 120 197 - -
Spst9g00711 278 SUPERFAMILY WRKY DNA-binding domain 132 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00711 Spst-Chr9 6066058 6067275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00711 6 269 WRKY Transcription Factor Family AT1G80840 44.406 6.12e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g00711 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00711 - - gmx:100127373 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01863 8 22928496 22929665 Spst9g00711 9 6066058 6067275 PCT