Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00700 ATGCGTGCCTTTATTCTAGCTTCCCATGATAGAGAACCTCAGAGCACAGGGCTTCAATCTCTTAGACAACTAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTGTCAATATTGGGGGATAAGATAAACAAGTTCACTGGGATGATAGAAGGTTTGATTTGGTCTCCAAGAAGCAGTGATGGTAAATGCGAAGTTGATGATTGGTGTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACTGCCTGTGTTGCAGTAATTAGAAACAACCAACTTGTTGTTGCCAATGCTGGTGATTCACGGTGTGTGATATCTCGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATATTAAAAGCTGGTGGTTTTATTCATGCTGGACGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAACAGAATAAATTTCTTCCTGCTGAAAAACAAATTTTAACTGCCAATCCAGACATAAACACTGTTGAGCTTTGTGACGAAGATGAATTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTGGTAGATTTTATTCATGAACAATTACACTCGGAAACGAAACTTTCTGCTGTGTGTGAAAGAGTACTTGACCAGTGTTTGGCACCATCAACTGCCAGTGGCGAGGGATGCGACAATATGACCATGATCGTGGTACAGTTAAAAAGACCTGCTCAGTCCAGTGCATCAACAGAGGAACAATCCTCGTCCAGTGCATCAACAGAAGAGCAATCCTCGTCAAACGCACAAGCTGAACCTGAAACACAACTAGAGAGAAGTGGAAGTTAG 894 0.4239 MRAFILASHDREPQSTGLQSLRQLMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGKCEVDDWCFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQILTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFIHEQLHSETKLSAVCERVLDQCLAPSTASGEGCDNMTMIVVQLKRPAQSSASTEEQSSSSASTEEQSSSNAQAEPETQLERSGS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00700 297 ProSiteProfiles PPM-type phosphatase domain profile. 1 256 IPR001932 -
Spst9g00700 297 MobiDBLite consensus disorder prediction 257 297 - -
Spst9g00700 297 CDD PP2Cc 85 256 IPR001932 -
Spst9g00700 297 SMART PP2C_4 26 254 IPR001932 -
Spst9g00700 297 PANTHER PROTEIN PHOSPHATASE 2C 23 255 IPR015655 GO:0004722|GO:0006470
Spst9g00700 297 Pfam Protein phosphatase 2C 82 241 IPR001932 -
Spst9g00700 297 SUPERFAMILY PP2C-like 80 258 IPR036457 -
Spst9g00700 297 Gene3D - 5 257 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00700 Spst-Chr9 5987712 5991156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00700 16 268 PP2C-type Phosphatase Gene Family AT2G25070 73.913 1.06e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00700 K17499 - gmx:100787778 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00700 9 5987712 5991156 Spst9g00700 9 5987712 5991156 ECH