Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00689 ATGAGCTATCTCAATTCAATTCTATCTGCTCCAACCCAGGTTAAAACTGCAGATGATGCAATTGTGAGCGGTGGGGGTCAGAGTCACAATGAAAAATTCAGCTATGGGTATGCTAGCTCTCCCGGCAAGAGATCTTCAATGGAAGATTTTTACGAGACAAGAATTGATGGTGTTAATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAACTTGTTCAGTAATTTGATAAATCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGATTCTGAGTTTCTGAAGTCAGAAAATAACCAAAACAAAGATGCCGGATCAACTGCTTCCACTGCGATTTTAGTTGGTGATCGCTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGTAATGCTATTGCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGGTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGAGCGTTTGGTGATAGACTCCTAAAGCAGTATGTTGTAGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAACTCCCTTGAGTTTCTTATCTTGGCTAGTGATGGATTATGGGATGTTGTCACAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATTCTGAGGAGGCAGCAAAGAGATTGATGCAAGAAGCATATCGAAGAGGTAGTGCTGACAACATCACATGTGTGGTGGTTCGTTTCTTGTTTAACCAAGGTGCTTCTTCTCACAGTAGTTCTGGAGGTGGTAATAAGCAAGCTTCAAAAGAAGGCTTGCGTGATAGGTGA 924 0.4232 MSYLNSILSAPTQVKTADDAIVSGGGQSHNEKFSYGYASSPGKRSSMEDFYETRIDGVNGEIVGLFGVFDGHGGARAAEYVKKNLFSNLINHPKFISDTKSAISDAYNHTDSEFLKSENNQNKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDNSLEFLILASDGLWDVVTNEEAVAMIKPIEDSEEAAKRLMQEAYRRGSADNITCVVVRFLFNQGASSHSSSGGGNKQASKEGLRDR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00689 307 SMART PP2C_4 24 278 IPR001932 -
Spst9g00689 307 MobiDBLite consensus disorder prediction 286 307 - -
Spst9g00689 307 CDD PP2Cc 33 280 IPR001932 -
Spst9g00689 307 PANTHER PROTEIN PHOSPHATASE 30 279 IPR015655 GO:0004722|GO:0006470
Spst9g00689 307 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Spst9g00689 307 FunFam probable protein phosphatase 2C 59 26 284 - -
Spst9g00689 307 SMART PP2C_SIG_2 45 280 IPR001932 -
Spst9g00689 307 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Spst9g00689 307 Gene3D - 25 284 IPR036457 -
Spst9g00689 307 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Spst9g00689 307 SUPERFAMILY PP2C-like 28 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00689 Spst-Chr9 5934364 5936483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00689 1 292 PP2C-type Phosphatase Gene Family AT4G31750 86.644 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00689 K17506 - gmx:100797070 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00689 9 5934364 5936483 Spst9g00689 9 5934364 5936483 ECH