Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00665 ATGGCCGCGATGGAGAAAATGGCAACCGAGGCGGAGGTGTGGTCAGTTACTTGCTACTGCTGCGGGTTAACAGAGGAGTGCACTGCGAGTTACATTGACGGTGTGAGGGAGAGGTATCAGGGTCGTTGGATTTGTGGGCTGTGTGCTGAGGCAGTGAAGGAAGAGGGTTTGAAGTTGAAAGGTGCTGATGTTAGCACCGATGAAGCACTGAAGCGCCACATGAAGTTCAGATCTTTCGCTTCAAGTCCTCCCAACAAACCCACCCATGACCTGATTCTCGCCATGAAGCAGCTTCTTTTTCGATCTTTGGATTCTCCCAGGAAAGATTCTTTAACCTGTTCGCCACTAGCTAGTTCTCACACATGTTTTTCACCTGGATCCTCGAAGGGGAGCCGCAAGAGATAA 405 0.5037 MAAMEKMATEAEVWSVTCYCCGLTEECTASYIDGVRERYQGRWICGLCAEAVKEEGLKLKGADVSTDEALKRHMKFRSFASSPPNKPTHDLILAMKQLLFRSLDSPRKDSLTCSPLASSHTCFSPGSSKGSRKR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00665 134 PANTHER OS01G0745000 PROTEIN 5 125 IPR012876 -
Spst9g00665 134 Pfam Protein of unknown function (DUF1677) 13 101 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00665 Spst-Chr9 5783034 5783438 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00665 - - gsj:114408868 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00665 9 5783034 5783438 Spst9g00665 9 5783034 5783438 ECH
Spst9g00665 9 5783034 5783438 Spst8g01477 8 14684810 14685241 ECH
Spst3g02772 3 77259912 77260349 Spst9g00665 9 5783034 5783438 ECH
Spst4g02141 4 62181739 62182221 Spst9g00665 9 5783034 5783438 ECH