Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00658 ATGGAACAGTATAAGGGAGCTCCATTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCTGATGCTTCTTATAGAGCTATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTTAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACCACAAAATTGATTATGCAATATCTTACCTTTGTTGGTGGACGTGCTGGTGGTGATGATAGAACAGTTGAACAACAAGTCCTTGAATCGAATCCACTCTTAGAGGCATTTGGCAATGCAAGGACTGTCAGGAATGACAATTCAAGCTTGAACCGCGTTTATGTAAATGTCAGATTCGCTTGGGGACATTATGCTTCGCTCAACGACTGGCGCCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAATGGTAAAATATCTGGTGCTGCTATTCGAACTTACTTACTAGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAAAGAAATTATCACTGCTTTTATCAATTATGTGCATCTGAAAGGGATGTGGAGAAGTATAAGTTGGGACATCCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTCTATGAATTAGATGGGATAAGCAGTGCTGAAGAGTACATGAAGACTAGGAGAGCAATGGATATTGTTGGCATAAGTCACGATGATCAGGAAGCCATATTTTGCACCTTAGCTGCGATTTTACACTTGGGTAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCATCAGTATTAAAAGATGATAAATCAAGATTTCATTTGCAGATGGCTGCCAATCTTTTCAGGTGTGATCTGAACTTACTGCTTGCAACATTATGTACCCGATCAATACAAACCCGAGAAGGAAATATTGTCAAAGCTCTTGATTGTAACGCCGCTGTTGCTGGCCGCGATGCTTTGGCGAAAACTGTCTATGCTCGTTTATTTGACTGGGTGAATACTAATTATTGTTGTTGTGACAGGCTTGTGGATAAGATCAATAGTTCTGTGGGCCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGCTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATCAGGGGCTAGACGTGGGACTTGTCGGCTTGAGAGGAGGAGGGGGTAGTCATTGTGGAAGGTCACTTGTTGCTGAAGCTGTTGTTGTGGAAGGTCATTGCAAAAGGTTGTCATTGCTTATTGGGGCATGTGTGGTGGAAACTTTGTTAGGGTTCTTTGTTTTCAAGAGAGATGAGGGTAAGGGACATGTTTTCAAGATGGAGCAGGAAGAATACAGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTATTGACAACCAAGATGTTTTAGATTTGATTGAAAAGGTTTCTGCAAAATCCTTTCTTGGCTGGAGGTTTTCTATTCTATGTTTCTATGTTCTCATGTATCATTCATATAAAAAGCCCATTGGTATCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTCTCTACAAAATTGTTTAAACACTTCCTATCACACCCTAGGTTAGAAAAGGAGAAGTTTTCAGAAACAGATTTCACCCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAGACACCTTCTTAGACAAAAACCGTGATTATGTAGTTGTAGAACATTGTAATCTGCTATCGTCTTCAAAATTCCCCTTTGTGTCGGCCCTTTTTCCTTTGCTAACAGAGGAATCTTCAAGGTCATCTTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAAACACTTAATACAACCCAGCCTCATTACATTCGGTGTGTCAAGCCTAATTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGATGTGGGGGTGTCCTTGAGGCTGTAAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTATTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCCGAATTTATGGATGGAAGTTACGATGATAAAGCTGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGGCCAAAGTATTTCTCAGGGCTGGTCAAATTTGCATTTTAGACTCTAGACGTGCGGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGGCGACTGCGAACATTTATTGCACACAGGGATTTCATCTCAATTCGAGCTGCTGCACTTTCTCTTCAAGCATGCTGCAGGGGATTTGGCTCCCTCCAAAGTGATGAGGGTGCAGCAGCAACAGCTATTACCACTCAGAATTATATATACTTCCGAAAGATATATGCTTTGAGACGGGAGAAAGCAGCAGCTATCTTGATTCAGAAATATCTCCGTATGTGTCTGATGAGGCATACTTATGTGAAATTATGTTATTCTTCTATTATTGTACAATCCAATGTTCGTGGTTTCACAACTCGTCAAAGGTTCTTGCACAGAAAGGAGCACAAAGCTGCCACTTCTATTCAGGCTTATTGGAGGATGTGCAAGGTTCGATATGCGTTCCTAAAACATCAAAATTCAATTGTAGCCATACAATGCCTTTGGCGGCGTAGACAGGCAAAAAGAGAGCTTCGTAGACTTAAACAAGAGGCTAATGAAGCTGGAGCCTTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGTTTACATGGCGGTTGCATCTTGAGAAAAAAATGAGGATTTCTAATGAAGAGGCTAAGCATGTTGAGGTTTCCAAGCTACAGAAGATGGTAGAGGCTCTAAATCTTGAATTAGATGCAGCTAAACTGGCAACAATTAATGAGTGCAACAGAAATGCAGTCTTGCAAAACCAGTTGCAATTATTAGGAAAGGAAAAATCTGCTTTAGAAAGAGATCTAATTGCAATGGATGAAGTGAGAAAGGAAAATGCCCAATTAAAGGCTTCATTGGATGCTTTTGAAAAGAAGAGCACAACTTTGGAGCTTGAGCTTGTTGGTGCTCAGAATGACCATGACAAAACCATTGAGAAAATGAGGGAGTTTGAACATAAGTGTTCTCAACTTGGGCAAGATGTGAAAAGGCTTCAGGAAAAGCTATCAAGTTTAGAGGATGAAAATCACGAGCTTCGTCAGAAAGCCTTAACTGTATCTCCTAAGATTAACCATCGAGGTTTAACAAAGTCATTTTCAGAATGTCGCAGTGTGAGGGGTAATGTGAATTGCGGCCATTGTGATCTCTATGGACTGAGAAGAAACTCTGTTTTTTGCCCCCTAAATGATGACATGTGGTGCTGTTTAATGTGCAATCTTGGGGTTTTGCCCCTCTATTTTGTTTATCCTATTTTGTCGCTTGCACTCCACTTGAAAGATAATCAACAGAGGCATCTTCTCTCATTATGCAAACTATTGCTCCTAGCTGTGTTTCAAGCCAAACTCTGGAACATTGTTCTCTGGTCTCTCTCTGTTCACATCCTTTTGGTCTATTCTGTTCACATCAAAAGGATTTTTGTTTTGTTTCAGATAATTTCTTTCACATGTCTCTTGAAGACTTCAGTTGTGTTTTGTTCTCTCATTTGCAACCTTTACGAAGAGACATCTGGTGCTGGTTTGGGTTACACTATCACTGATTACGATGATGATCACCACTTGAAGACCTTTCCCAATAATTTTATTGGTGGATGCAGATTTGAGAATTTTGTTATCCCTAAACAAAATGAAAGACAAGGAAGTGATAATAATGAACTCCTCTCTAGATGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCACTGGCAGCTTGTATCATATACAAATGTCTTCATCATTGGCATGCCTTTGAATCTGAACGCACAGCCATATTTGATCACATTGTCGATGGAATTAATGATGTCCTAAAGGTTAGAGATGATGACATTGTCTTGCCGTATTGGCTGTCCAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATTCAAATGGCTTTTTAACAGCCACTGCTCAACGTTATGCCAGATCATCTGGCTTGACTAGTCGAATAGGACATGATGATTCTATGCAGATCATGGAGTCATTGAGTGATCGACATTCTTCTGCTCATTTGATGATAGCTGCTAGGAGAAGCTCAAAAATGCAGAAAATTTTGCATTTCACCCTAGTTGGTGGTCTCCCACTTATTGGATATGATGATAGTACAGTACATGTGGAAGCAAGATATCCAGCTATTCTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTTTGGCATCATGTATTCAGGTGGCACCTAAAACAGGACGGATGCTAGGTGGTAAATCATCTAAATCTCCTGGTGGGCTTCCTCCACAATCACCTGTTGCTCAATGGGACAACATCATCAAATTCTTGGATTCACTCATGAGCCACATGACTGCAAATCATGTACGGTCCTTTTTCATTCGCAAGCTAGTGACTCAGGTTTTTTCCTTCATCAATATTACACTATTCAACAGCCTTCTGTTGCGACGTGAATGCTGTACTTTCTCAAATGGTGAATATATAAAATCTGGGCTTGCAGAACTGGAGAAATGGATTGCTAATGCAAATGAGGAGGTAATACATCAGAAGAGAAAAAAGTCATTGGAAGAAATTCGACAGGATCTTTGTCCGGTAGTTAGTGAAATGAAGGACATTCTGAGCAAGGACAATCAGAGTTTGACCTCTAATTCATTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGATATAGATATGGCAATCCCTGCTATAAATGCTGATGATATTGATCCTCCAGCATTTTTGTGCGAATATCCCTGTGCCCAGTTTCTTGTTTTACATGAGAAGTAA 4992 0.396 MEQYKGAPFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAGGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSLNRVYVNVRFAWGHYASLNDWRRFGKFVEIQFDSNGKISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGISSAEEYMKTRRAMDIVGISHDDQEAIFCTLAAILHLGNIEFSPGKEHDSSVLKDDKSRFHLQMAANLFRCDLNLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWVNTNYCCCDRLVDKINSSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQGLDVGLVGLRGGGGSHCGRSLVAEAVVVEGHCKRLSLLIGACVVETLLGFFVFKRDEGKGHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKVSAKSFLGWRFSILCFYVLMYHSYKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKFPFVSALFPLLTEESSRSSYKFSSVASRFKQQLQALMETLNTTQPHYIRCVKPNSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKAVTLKILQKLKLENFQLGRAKVFLRAGQICILDSRRAEVLDNAAKCIQRRLRTFIAHRDFISIRAAALSLQACCRGFGSLQSDEGAAATAITTQNYIYFRKIYALRREKAAAILIQKYLRMCLMRHTYVKLCYSSIIVQSNVRGFTTRQRFLHRKEHKAATSIQAYWRMCKVRYAFLKHQNSIVAIQCLWRRRQAKRELRRLKQEANEAGALRLAKNKLEKQLEEFTWRLHLEKKMRISNEEAKHVEVSKLQKMVEALNLELDAAKLATINECNRNAVLQNQLQLLGKEKSALERDLIAMDEVRKENAQLKASLDAFEKKSTTLELELVGAQNDHDKTIEKMREFEHKCSQLGQDVKRLQEKLSSLEDENHELRQKALTVSPKINHRGLTKSFSECRSVRGNVNCGHCDLYGLRRNSVFCPLNDDMWCCLMCNLGVLPLYFVYPILSLALHLKDNQQRHLLSLCKLLLLAVFQAKLWNIVLWSLSVHILLVYSVHIKRIFVLFQIISFTCLLKTSVVFCSLICNLYEETSGAGLGYTITDYDDDHHLKTFPNNFIGGCRFENFVIPKQNERQGSDNNELLSRCIKEDLGFKNGKPLAACIIYKCLHHWHAFESERTAIFDHIVDGINDVLKVRDDDIVLPYWLSNTSALLCLLQRNLHSNGFLTATAQRYARSSGLTSRIGHDDSMQIMESLSDRHSSAHLMIAARRSSKMQKILHFTLVGGLPLIGYDDSTVHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLASCIQVAPKTGRMLGGKSSKSPGGLPPQSPVAQWDNIIKFLDSLMSHMTANHVRSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYIKSGLAELEKWIANANEEVIHQKRKKSLEEIRQDLCPVVSEMKDILSKDNQSLTSNSFLLDDDMSIPFSAEDIDMAIPAINADDIDPPAFLCEYPCAQFLVLHEK 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00658 1663 Gene3D - 667 775 - -
Spst9g00658 1663 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Spst9g00658 1663 Gene3D Kinesin motor domain 625 663 IPR036961 -
Spst9g00658 1663 ProSiteProfiles Myosin motor domain profile. 1 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 Coils Coil 1038 1072 - -
Spst9g00658 1663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 773 IPR027417 -
Spst9g00658 1663 ProSiteProfiles Dilute domain profile. 1316 1663 IPR002710 -
Spst9g00658 1663 PANTHER MYOSIN 440 1598 - -
Spst9g00658 1663 SMART iq_5 735 757 IPR000048 GO:0005515
Spst9g00658 1663 SMART iq_5 826 848 IPR000048 GO:0005515
Spst9g00658 1663 SMART iq_5 851 873 IPR000048 GO:0005515
Spst9g00658 1663 SMART iq_5 803 825 IPR000048 GO:0005515
Spst9g00658 1663 SMART iq_5 874 896 IPR000048 GO:0005515
Spst9g00658 1663 Pfam DIL domain 1528 1601 IPR002710 -
Spst9g00658 1663 ProSiteProfiles IQ motif profile. 875 904 IPR000048 GO:0005515
Spst9g00658 1663 SMART MYSc_2a 1 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 Coils Coil 972 992 - -
Spst9g00658 1663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 792 902 IPR027417 -
Spst9g00658 1663 CDD MYSc_Myo11 1 721 IPR036018 -
Spst9g00658 1663 Gene3D Kinesin motor domain 120 353 IPR036961 -
Spst9g00658 1663 Coils Coil 996 1030 - -
Spst9g00658 1663 SMART DIL_2 1527 1610 IPR002710 -
Spst9g00658 1663 Gene3D - 854 903 - -
Spst9g00658 1663 Gene3D - 802 853 - -
Spst9g00658 1663 FunFam Myosin heavy chain 158 212 - -
Spst9g00658 1663 Gene3D - 354 379 - -
Spst9g00658 1663 Gene3D - 440 624 - -
Spst9g00658 1663 Pfam IQ calmodulin-binding motif 853 872 IPR000048 GO:0005515
Spst9g00658 1663 Pfam IQ calmodulin-binding motif 806 824 IPR000048 GO:0005515
Spst9g00658 1663 Coils Coil 888 918 - -
Spst9g00658 1663 Gene3D Myosin VI head, motor domain, U50 subdomain 217 337 - -
Spst9g00658 1663 Gene3D Myosin VI head, motor domain, U50 subdomain 568 602 - -
Spst9g00658 1663 Pfam Myosin head (motor domain) 1 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 Pfam Myosin head (motor domain) 119 379 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 Pfam Myosin head (motor domain) 498 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 Pfam Myosin head (motor domain) 440 473 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 PRINTS Myosin heavy chain signature 344 372 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 PRINTS Myosin heavy chain signature 80 107 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 PRINTS Myosin heavy chain signature 457 485 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 PRINTS Myosin heavy chain signature 33 58 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst9g00658 1663 Coils Coil 944 964 - -
Spst9g00658 1663 Gene3D Kinesin motor domain 1 108 IPR036961 -
Spst9g00658 1663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 379 IPR027417 -
Spst9g00658 1663 Gene3D - 158 215 - -
Spst9g00658 1663 ProSiteProfiles IQ motif profile. 829 856 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00658 Spst-Chr9 5708936 5746568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00658 1271 1659 Myosins gene family AT4G33200 57.701 1.35e-138 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00658 K10357 - aof:109833590 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00658 9 5708936 5746568 Spst9g00658 9 5708936 5746568 ECH