Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00656 ATGGCACTTCATGTATATGATGATATAATGAGGATGACTGAAAACTTGAGTGAGAAGTATATAATTGGGTATGGTGCATCAAGTACAGTTTACAAATGTGTTCTTAAGAATTGCAAGCCAGTGGCTATCAAGAAGCTCTATTCCCACTACCCCCAATGCTTGAAAGAGTTTGAGACTGAGCTTGAGACAGTCGGCAGCATTAAGCATAGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCTCCATATGGAAACCTCCTCTTTTATGACTACATGGAAAATGGCAGTCTGTGGGATCTTTTGCATGGACCTACCAAGAAGAAAAAGCTTGATTGGGATGTTCGTCTAAAAATAGCACTTGGATCAGCTCAAGGGCTGGCATATCTACACCATGATTGCTGTCCACGTATCATTCACAGGGATGTGAAATCATCTAATATATTACTAGACAAAGACTTTGAGCCTCATCTCACTGATTTTGGCATTGCAAAGAGTCTATGCCCCTCTAAGTCCCACACTTCAACTTACATAATGGGTACAATTGGCTACATTGACCCCGAGTATGCTAGAACTTCCCGGCTCACCGAGAAGTCTGATGTGTATAGCTACGGTATTGTATTACTCGAGCTGCTAACTGGGAGAAAAGCTGTTGACAACGAATCAAACCTTCATCATCTGATTTTGTCCAAGACAGCTAATGATGCCGTAATGGAAACCGTTGATCCTGATATTACTGCCACATGCAAGGACATGGGAGCAGTGAAAAAGGTTTTTCAGCTTGCTCTTTTATGCACCAAGAAGCAACCAGTGGATAGACCCACAATGCACGAGGTTACACGCGTGCTGGGAAGTCTTGTGCCACCAAAAGAATCCGTCCCAATGCAAGTACTCTTACCTGATTCACAGCCATCTGCTATAATGCAATGCTACAAGGATGAATATGCAAATCTCAAAACTCCACACTTGGTCAACTGTCCCTCCATGAGCACCTCTGATGCCCAACTCTTCCTCAAATTTGGAGAATTAATATCTCAAAACAGTGCGGGAGCAGTTTCAGAATCTATGTATATTTAA 1074 0.4255 MALHVYDDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHGPTKKKKLDWDVRLKIALGSAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANDAVMETVDPDITATCKDMGAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPPKESVPMQVLLPDSQPSAIMQCYKDEYANLKTPHLVNCPSMSTSDAQLFLKFGELISQNSAGAVSESMYI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00656 357 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 92 292 - -
Spst9g00656 357 SMART serkin_6 16 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00656 357 SUPERFAMILY Protein kinase-like (PK-like) 4 282 IPR011009 -
Spst9g00656 357 Gene3D Transferase(Phosphotransferase) domain 1 92 294 - -
Spst9g00656 357 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 5 282 - -
Spst9g00656 357 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 91 - -
Spst9g00656 357 Pfam Protein kinase domain 19 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00656 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Spst9g00656 357 ProSiteProfiles Protein kinase domain profile. 16 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00656 357 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Spst9g00656 357 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00656 Spst-Chr9 5703835 5705651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00656 1 347 Receptor kinase-like Gene Family AT5G62230 66.282 4.57e-164 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Spst9g00656 Pkinase 5.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00656 K20718 - gmx:100804875 665.225