Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00654 ATGAACTCTCTCGTTGGATTTGGTTCTATAGCTGCATTCATCATTAGTTCCATCTCGCTACTTAACCCCGGCCTAGCATGGGATGCATCCTTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTGGGACGTTCTCTGGAAGAAAAGGCTAGGATCCAAGCATCTAGCGATATGAATGAACTGCTTTCAAGACTTGTGATTACTTCAACAGAAGGTCCACCTTCCACTGAAACTGTGCTTTGCTCTGATGCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGATTCTGTGCTGGTGTTTCCTGGAGAAACTATTCCTATAGATGGAAAGGTTATTTCAGGAAGAAGTGTTGTAGATGAATCCATGCTTACAGGGGAATCACTTCCTGTATTTAAGGAGGAAGGCCTCACAGTTTCTGCAGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGTTCCAACACTATGATATCAAAGATTGTACGCATGAACCATGCATCAAATGATGATATTAATTTGGAATATTTTGAGCTAGAATTGTTGATAAGTCCATTGATCTGCGATGTTGAGGATGCACAATCACGTGAAGCACCTGTACAGAGGCTTGCAGATTCAATAGCAGGCCCATTTGTATACAGTGTGATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTTTTGGAACACACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGAAGGAGATCCTTTGCTTTTGAGTTTAAAACTTTCTGTGGATGTTTTGGTCGTTTCTTGTCCTTGTGCATTGGGTCTTGCTACGCCCACAGCAATCCTGGTTGGCACCTCACTTGGAACCCTGACGAAAGGGAAACCAGTTGTGTCGGCCATAGGCTCTATCCATTATGGAGAGTCTGACATTCTTCGGATTGCTGCTGCAGTGGAGAAGACTGCACCTCACCCAATAGCAAAGGCTATTCTCAATGAAGCTGAGTCATTGGAGTTGATCCTTCCTGTCACAAAGCGACAGTTAGTTGAACCAGGTTTTGGTACTTTAGCAGAAGTAAATGGACATTTGATTGCAGTTGGATCTTTGGAATGGGTTCATGAACGTTTCCAAACAAGAGTGAACCCGTCTGATTTGACAAATCTGGAACATAGTTTGATGAATCATTCATCAAATACAATATCTTCTAAGTATTCGAAAACTGTTGTCTATGTTGGACGTGAAGGAGAGGGCATCATTGGTGCTATTGCCATATCTGACACTGTGCGTGAAGATGCTGAATCTACTGTAATGAGGCTCAAGCAGAAGGGGATTAAAACGGTCCTCTTGTCAGGAGACAGGGAAGAGGCAGTTGCAACAGTAGCAGATACAGTTGGAATTGAAAATGATTTTGTCAAAGCATCTTTGTCTCCACAACAGAAATCTAGATTTATTTCCTCTCTAAAAGCTGCCGGACATCATGTTGCAATGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGCTATAGCGGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCTATTATACTTCTAGGGAACAAAATTTCACAAGTTGTCGATGCGCTAGACCTAGCACAGGCAACAATGGCAAAAGTGTACCAAAATTTGTCTTGGGCGGTCGCCTATAATGCTGTTGCCATTCCCATTGCTGCCGGTGTGCTACTTCCCCAATTTGACTTTGCTATGACACCCTCACTTTCAGGAGGACTGATGGCTCTGAGCTCCATCTTCGTGAAATGTGGTGATTACCTTTCGAACGAGAAGTTGGCATGTGACCAAAGCAGAGGAAGCAAGGAAGACAGAAGTTTGTCTTAA 1896 0.432 MNSLVGFGSIAAFIISSISLLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSRLVITSTEGPPSTETVLCSDAICVEVPTDDIRVGDSVLVFPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSTGSNTMISKIVRMNHASNDDINLEYFELELLISPLICDVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYFFGTHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGTLTKGKPVVSAIGSIHYGESDILRIAAAVEKTAPHPIAKAILNEAESLELILPVTKRQLVEPGFGTLAEVNGHLIAVGSLEWVHERFQTRVNPSDLTNLEHSLMNHSSNTISSKYSKTVVYVGREGEGIIGAIAISDTVREDAESTVMRLKQKGIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSRFISSLKAAGHHVAMVGDGINDAPSLAIADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMAKVYQNLSWAVAYNAVAIPIAAGVLLPQFDFAMTPSLSGGLMALSSIFVKCGDYLSNEKLACDQSRGSKEDRSLS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00654 631 SUPERFAMILY Calcium ATPase, transduction domain A 82 173 IPR008250 -
Spst9g00654 631 PRINTS P-type cation-transporting ATPase superfamily signature 501 520 - -
Spst9g00654 631 PRINTS P-type cation-transporting ATPase superfamily signature 424 435 - -
Spst9g00654 631 PRINTS P-type cation-transporting ATPase superfamily signature 124 138 - -
Spst9g00654 631 PRINTS P-type cation-transporting ATPase superfamily signature 288 302 - -
Spst9g00654 631 PRINTS P-type cation-transporting ATPase superfamily signature 446 456 - -
Spst9g00654 631 FunFam Copper-transporting ATPase 1, putative 53 177 - -
Spst9g00654 631 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 309 434 IPR023299 GO:0000166
Spst9g00654 631 Gene3D - 299 432 IPR023299 GO:0000166
Spst9g00654 631 Pfam E1-E2 ATPase 77 174 - -
Spst9g00654 631 Pfam E1-E2 ATPase 196 291 - -
Spst9g00654 631 Gene3D - 293 552 IPR023214 -
Spst9g00654 631 Pfam haloacid dehalogenase-like hydrolase 293 515 - -
Spst9g00654 631 FunFam Copper-transporting ATPase PAA2, chloroplastic 299 432 - -
Spst9g00654 631 NCBIfam HAD-IC family P-type ATPase 203 593 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g00654 631 Gene3D - 54 177 - -
Spst9g00654 631 PANTHER ATP7, ISOFORM B 293 607 - -
Spst9g00654 631 SUPERFAMILY HAD-like 293 590 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00654 Spst-Chr9 5682404 5693179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00654 1 611 Primary Pumps ATPases AT1G63440 32.979 3.71e-86 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00654 K17686 - gmx:100127402 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00654 9 5682404 5693179 Spst9g00654 9 5682404 5693179 ECH