Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00645 ATGGAAAATGATAGCATATTCAAAACTATGGCATCGTGTTTTGCCTTGCTACTTTTGTATGTGATGATTAGATTTGTGAATATCATATGGTGGAGACCCAGAAATACTGAGAAAATATTGAGTAAGCAAGGGATTAGAGGATCTTCATACAAGCTTTTTACTGGAGACACTTCAGACATGAAAGACTCTGTCCAAAAGGCATTATCAAAAGCCACCTCCCTCAACCATCAAATCATCCCTCGAGTCATCCCTTTCCTGCACAAAATGGTTCAGCAACATGGAAATATTTCATTGTGTTGGTTTGGAAGAAGACCAAGACTCATAATAGCAGATGCAGAGCTTACACGATTGGTTTTAACAAATAAGAATGGGCACTTTGTGAAACCACCACGAAACCCCCTCATCAAACTTCTATCTTTAGGATTGTCTTCATTGGAAGGCGAAACTTGGACCAAACGCAGAAGAGTAGTAACATCAGCTTTCCACCTTGAGAAGTTGAAGGCAATGGTGCCAGCATTTTCAAGCAGCTGTTACAACATGATCGAGCGATGGGAAAAATCAGTAGAAACTGAAGGATGGTGTGAATTGGATGTTTGTTCAGAATTCAACATTCTTACTGGTGATGTAATAGCTCGAACTGCCTTTGGAAGTAGCTACCAAGAAGGAAAGAAAATTTTTGAACTGCAAAAGGAACAAGCTATCTTGGTCAACGAAGCCTTAAACAGCCTCTATATCCCAGGTTTCAGATTCTTACCAACAACAAAGAACAAGCGTAGGTACAACCTAGATATCCAAATCAAAACTATATTGCGAGACATTATTCAGAAGAAAGAGCGAGCAATGAAAGAAGGTGAAGTAAAAGAACATGATTTACTAAGCATACTACTACAGTGTAGAGAACAGAGTAATTCTTTAACAACAGATGATGTGATTGAGGAATGCAAGTTGTTTTACTTTGCTGGCCAAGTGACCACAGCCAACCTACTTGCATGGACTATGATTGTTTTATCTATGCATCTTGATTGGCAAGAAAAGGCAAGAACAGAGGTGTTGGAGATTTTTGACAAAACAACACTTGATTATGAAGGCATAAACCACCTCAAGATAGTGTCAATGATATTGTATGAAGTTCTGAGATTATATCCTCCCATAACAGTGCTTAGCAAATACAATTGGTGTGAAACAAGGGTGGGAAACTTGTCCATACCAGCAGGGGTTGAATTTTGTTTACCTCTGTTACTTGTTCATAATGATAGCAACTATTGGGATAAGCCAGAAGAGTTCAACCCAGAAAGATTTAATGAAGGGGTTTCAAAAGCTTCAAAGGATCACATTGCTTTCTATCCTTTTGGTTGGGGCCCAAAAACTTGTCCTGGCCAAAACTTTGCCTTCTTAGAAGCAAAGATGGCTCTGGCTTTGATTCTTCAGCACTTCTCTTTCCAACTCTCACCCACTTATTCTCATGCTCCAACTACTTGTATTACTCTTAAGCCACAACATGGAGCTCCCATTATTATTCGTCGCATTAAGTCTTCTAAATTAAGTTAG 1548 0.3902 MENDSIFKTMASCFALLLLYVMIRFVNIIWWRPRNTEKILSKQGIRGSSYKLFTGDTSDMKDSVQKALSKATSLNHQIIPRVIPFLHKMVQQHGNISLCWFGRRPRLIIADAELTRLVLTNKNGHFVKPPRNPLIKLLSLGLSSLEGETWTKRRRVVTSAFHLEKLKAMVPAFSSSCYNMIERWEKSVETEGWCELDVCSEFNILTGDVIARTAFGSSYQEGKKIFELQKEQAILVNEALNSLYIPGFRFLPTTKNKRRYNLDIQIKTILRDIIQKKERAMKEGEVKEHDLLSILLQCREQSNSLTTDDVIEECKLFYFAGQVTTANLLAWTMIVLSMHLDWQEKARTEVLEIFDKTTLDYEGINHLKIVSMILYEVLRLYPPITVLSKYNWCETRVGNLSIPAGVEFCLPLLLVHNDSNYWDKPEEFNPERFNEGVSKASKDHIAFYPFGWGPKTCPGQNFAFLEAKMALALILQHFSFQLSPTYSHAPTTCITLKPQHGAPIIIRRIKSSKLS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00645 515 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 SUPERFAMILY Cytochrome P450 78 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Spst9g00645 515 Pfam Cytochrome P450 85 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 Gene3D Cytochrome P450 79 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00645 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00645 Spst-Chr9 5637908 5641219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00645 26 505 Cytochrome P450 AT3G14620 46.901 2.23e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00645 - - aip:107623710 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00645 9 5637908 5641219 Spst9g00645 9 5637908 5641219 ECH