Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00636 ATGAGTTTGGGCACCGCGGAGGATGATTCGGGTTCCGAAATCCACATCCCAGCGGAGATTGACTGGCACATGTTGGATAAGTCCAAGTTTTTCTTCCTCGGCGCCGCCTTATTCTCTGGCGTTTCCTTCACGCTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAGGTTTCCTCTTCGCGCTTCTCGTGCCTTAACATGTCTTGCGCCATTATGCGCTACGAGGGCCTCAGAGGCTTCTACAAAGGCTTTGGCACTTCCCTAATGGGAACAGTTCCCGCGCGTGCGCTCTACATGGCCTCTCTTGAAATCACAAAAAGTAACGTCGGCACTGTTTTTCTAGAATTGGGGTTCTCCGACACGACGGCGGTGGCGGTGGCTAATGCTGCCGCGGGTGTTACTTCGGCCATGGCGGCGCAGCTGGTGTGGACGCCGGTTGATGTCGTGAGTCAAAGGCTCATGGTTCAGGGGAGTGGAGGGAATAAAAGCATTCTTGCGAATCTCAATTCTGAGAGTTACAGGAACGGGTTTGATGCGTTTAGGAAGATTCTGTATGCTGATGGAGCAAGAGGGTTCTACAGGGGGTTTGGGATTTCGATATTGACTTACGCCCCTTCCAATGCGGTGTGGTGGACTTCTTATTCCATGGTTCACAGACTAATTTGGGGGGCTTTTGGTTCCTACAGGAGTAAGGGTAAGAGTGAAAATTTGAGTGGTTTTAGGCCTGATTCGAAGACAATGGTGGCGGTTCAAGGGCTGAGTGCTGTTATGGCTAGTGGGGTATCTGCAATAGTAACAATGCCTCTTGACACGGTTAAGACAAGGTTGCAGGTGTTGGATTGTGAAGAGAATGGGAGAAGGAGGCCTTTAACTTTTGTTCAGACCGTGAGGAATTTGGTGAAGGAAGGTGGATTGCTTGCTTGTTACAGAGGATTGGGACCAAGATGGGCTTCCATGTCATTGTCCGCTACAACTATGATTACTACTTACGAGTTTTTGAAAAGAATGTCTACCAAGAGTCAAGAGGATTTGACTCCTCGATAA 1044 0.4981 MSLGTAEDDSGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSFTLYPMVVLKTRQQVSSSRFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTVPARALYMASLEITKSNVGTVFLELGFSDTTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGSGGNKSILANLNSESYRNGFDAFRKILYADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYRSKGKSENLSGFRPDSKTMVAVQGLSAVMASGVSAIVTMPLDTVKTRLQVLDCEENGRRRPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSQEDLTPR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00636 347 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Spst9g00636 347 Pfam Mitochondrial carrier protein 36 107 IPR018108 -
Spst9g00636 347 Pfam Mitochondrial carrier protein 248 340 IPR018108 -
Spst9g00636 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Spst9g00636 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Spst9g00636 347 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Spst9g00636 347 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Spst9g00636 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Spst9g00636 347 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 342 - -
Spst9g00636 347 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Spst9g00636 347 Gene3D Mitochondrial carrier domain 29 345 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00636 Spst-Chr9 5550847 5551890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00636 13 342 Chloroplast and Mitochondria Gene Families AT5G26200 67.470 9.62e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00636 K15121 - gmx:100784202 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00636 9 5550847 5551890 Spst9g00636 9 5550847 5551890 ECH