Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g00632 | ATGAGTGATAAAAATCCAAAACCACCAGATTATTCATCTGACAGTGATTTCACCAAGCAATGGTCTTCGGAGCTCTCTGGGTACCTGAATTTGGATGATGATTGGCCAGATGATGACCCTGATTCATTTGTTTCATGCCATGTTCTCACCCAGGACATTCAAGCCAATGAAGGTGGAGGTAGCACCTCCCATGAAGGGTCTTCTAGCAGAGAAGTTGGTAATGAACATGAGAAGAAGGAAGTGAGAGATAGAGTTGCATTCATAACAAAGTCAGAGATAGAAATAATGGATGACGGGTTCAAGTGGAGGAAGTACGGGAAGAAGAAGGTGAAAAACAGCCCCAATCCAAGGAACTACTACAAGTGTTCAGTAGACGGATGTTCAGTTAAAAAGACAGTCGAAAGAGACAAGGATGATCCGAGGTATGTAATAACAACCTACGTAGGCATCCACACTCACCCGAGTCACTCTTAA | 474 | 0.4325 | MSDKNPKPPDYSSDSDFTKQWSSELSGYLNLDDDWPDDDPDSFVSCHVLTQDIQANEGGGSTSHEGSSSREVGNEHEKKEVRDRVAFITKSEIEIMDDGFKWRKYGKKKVKNSPNPRNYYKCSVDGCSVKKTVERDKDDPRYVITTYVGIHTHPSHS | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g00632 | 157 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 23 | 155 | IPR044810 | GO:0003700 | |
Spst9g00632 | 157 | SUPERFAMILY | WRKY DNA-binding domain | 88 | 155 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00632 | 157 | MobiDBLite | consensus disorder prediction | 47 | 68 | - | - | |
Spst9g00632 | 157 | SMART | WRKY_cls | 96 | 155 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00632 | 157 | FunFam | WRKY transcription factor 57 | 82 | 156 | - | - | |
Spst9g00632 | 157 | ProSiteProfiles | WRKY domain profile. | 91 | 156 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00632 | 157 | MobiDBLite | consensus disorder prediction | 42 | 79 | - | - | |
Spst9g00632 | 157 | Gene3D | WRKY domain | 83 | 149 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst9g00632 | 157 | Pfam | WRKY DNA -binding domain | 97 | 154 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g00632 | Spst-Chr9 | 5521001 | 5521710 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g00632 | 29 | 155 | WRKY Transcription Factor Family | AT5G26170 | 51.701 | 7.33e-40 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Spst9g00632 | WRKY | 3.9e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g00632 | - | - | gmx:100819462 | 231.876 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst9g00632 | 9 | 5521001 | 5521710 | Spst9g00632 | 9 | 5521001 | 5521710 | ECH |