Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00624 ATGGAGGATCTCGAGGAGGAAGAGAACGTAGCGGAGGAGGTGTTGGGGTCAAGCTTGACCATGGAGAAGGTTGCGGCGGCGAAGAAGTTCATTGAGAATCATTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTGTTAGAAAGAAAATTAGCATCTTCGGATGTGCCAAATGAGGAGCGAATCAACCTCATCAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTAATGATTTTGAACTCTTGACCATCATTGGAAGGGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCGGGAAATATTTATGCTATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCTGAAGTTGCCAGTCACTGCATTGTTAAACTTTACTACTCATTTCAGGATGCTGAGTACTTGTATTTGATTATGGAGTATCTGCCTGGTGGTGATGTTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAATGTTGCTAGATTTTATATTGCACAAAGTGTTCTGGCGATAGAATCTATTCACAAACACAATTACATTCACAGAGATATTAAACCTGATAACCTACTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGTCTCTGTAAGCCTCTTGATTGTATTGCCTTGTCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAGCCAATGGATGTTGATGGATGTTTGCGAGATGCGGACAATCGGAGCAGCTGGAGAAGTCCACGTGAACAGCTTCAACATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACACCAGACTACATTGCTCCTGAAGTACTTCTGAAAAAAGGCTATGGGATGGAATGTGATTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCCGATGACCCAATAACTACATGCCGAAAGATTGTTCACTGGAGACATCATTTAAGATTTCCAGAAGATACCCAGTTAACACTCGAGGCCAAGGATCTAATTTATAGGTTGCTATGTGATGTTGATCATAGGTTAGGTACTCGAGGGGCCCATGAAATAAAGGCTCATCCTTGGTTCAATGGTGTGGAGTGGGATAAGCTCTATGAAATGGAGGCAGCATTTAAACCTCAAGTCAACGGGGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAGGTGGATCCACCAACAGCGGCAAGAAGTGGGTCTGGATCCTCACGAAAGATGCTAACTACCAAAGATCTAAGCTTCGTTGGTTACACTTACAAGAACTTCGATGCTGTAAAGGAAGGGCTTCGTCAATCTTTTGGTGATTCCATGCAAGATTATGCTTCTAAACGGGCAGCTGAAGAAACAAGTTTACAAATGCTTGCGTCTTCTGGAGATCCCATGTTGGCTGTGGAAGACTTGCCTTCTCTAGTGGCAGTTGCTGGATTGGGCTTGAAGCGGATGGCCAACCATTTTGTGCTTTGTTTATCCGTTATAAAGTTTGTTTCTTTCAAGTTTCGAGCTGATTCTCTCTCACCAGAGTTGACGGAGATAAGGATTTTGATGGAGGAGATGTCAACCACGGTTGCAGTGCCATTGAGAGTAGGTAATTCAGTGTGTGATAAGTCAACCATTTCTACCCACGTGGATGTGTCTAGAATTAAGCTGATGGCAGATGCAGGGTTGTTATCCAATTCTATAACTAAGGTTTCTACTGATACTTTTATTGGTTCGGATGAGGATCATCACGGTGGCCGTCTTGAGGATGAAGTTGGTATTACAGCAGTCACACCTCCAGAGCAGGGAAGAGAAGGAGAAATTCCGATGTTGGGTATGGTATCCCAAAATATAAACTCTTTAGTTGTTGGTGATGAAGCTTTAATCCCAGAAATTGAGGATGATGATTTGATATCACTGGAAGGTGATCCAATTATTGATAGTTCTCTTTCAGCAGCCAGTGAGAATAGTGGATTTTGTGGAGATGAGTTCATCAGTTCTGCTGCAGATTTGGGGACAACAAGTTCCACAGACATAGAGAACAGCATCTCCACTGTCAAAATTGCAGCTGGGGCTACTGATTTGGGTGCGTCAAATGTAGTGAAAGATGTTGCTGTGAGCCTTGAAGAAGAGACACGACTTAGATCTGACCCCAAGGCTACTACAGGTGTTCTTCATCAACAAACTCTGGAAAGATCTGTGAGTGGAACAGTTGGTAGAAGTGTTTTTGAATTAGATTGTACCCCACTTTGGGGATTTACATCTGTGTGTGGAAAAAGACCTGAGATGGAGGATGCACTTGCAACTGTACCTCGGTTTTTGAAAATTCCTATTCACATGCTAATTGGTGATAGGGTACCTGATGGAATAGACAAATGTTTCAAGGAGCAGACAACACATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCCGCCAGCGCTTGCACTTGGCCTTGGCCGAAGAAATAGAATCTGTCAAGCAATGTCTATTAGTTGAGAGTGCCAACGATGATTGTCGAGATCTGTGGAAAAAAGCTTTCACCAATTGTTTTCTGAAGGTTGATTCTGAAGTTGGGGGGGAAGTTAATTCTGATCCTGTTGCCCCAGAAACTGTTGGATCCACTGCTGTTGTTGCTATTATATGTTCATCTCATATTGTAGTTTCTAACTGTGGTGATTCAAGAGCGGTTCTGTGTCGTGGCAAAGAGCCCATGGCCCTATCTGTTGATCATAAACCAAATCGAGATGATGAATATGCTAGAATTGAGGCAGCTGGAGGCAGGGTGATACAATGGAACGGTCACCGAGTTTTTGGTGTTCTTGCTATGTCAAGGTCTATTGGTGATAGGTATTTGAAGCCATGGATTATTCCAGACCCTGAGGTGACATTTCTTCCTCGTGCGAAAGATGATGAATGTCTCATTCTGGCCAGTGATGGCCTGTGGGATGTCATGACAAACGAAGAGGTGTGTGACATTGCTCGGCGGCGCATACTTCTCTGGCACAAGAAAAATGGGTCGGCACGGCCCGCAGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCTGCAGAGTACCTATCAAATCGCGCCCTTCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGAGCAAGACATGA 3303 0.4381 MEDLEEEENVAEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVNDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVMTLLMREDTLSENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCIALSTLHENQTMDDETLAEPMDVDGCLRDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRHHLRFPEDTQLTLEAKDLIYRLLCDVDHRLGTRGAHEIKAHPWFNGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDPPTAARSGSGSSRKMLTTKDLSFVGYTYKNFDAVKEGLRQSFGDSMQDYASKRAAEETSLQMLASSGDPMLAVEDLPSLVAVAGLGLKRMANHFVLCLSVIKFVSFKFRADSLSPELTEIRILMEEMSTTVAVPLRVGNSVCDKSTISTHVDVSRIKLMADAGLLSNSITKVSTDTFIGSDEDHHGGRLEDEVGITAVTPPEQGREGEIPMLGMVSQNINSLVVGDEALIPEIEDDDLISLEGDPIIDSSLSAASENSGFCGDEFISSAADLGTTSSTDIENSISTVKIAAGATDLGASNVVKDVAVSLEEETRLRSDPKATTGVLHQQTLERSVSGTVGRSVFELDCTPLWGFTSVCGKRPEMEDALATVPRFLKIPIHMLIGDRVPDGIDKCFKEQTTHFFGVYDGHGGSQVANYCRQRLHLALAEEIESVKQCLLVESANDDCRDLWKKAFTNCFLKVDSEVGGEVNSDPVAPETVGSTAVVAIICSSHIVVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGRVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFLPRAKDDECLILASDGLWDVMTNEEVCDIARRRILLWHKKNGSARPAERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00624 1100 FunFam Non-specific serine/threonine protein kinase 299 418 - -
Spst9g00624 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Spst9g00624 1100 SUPERFAMILY Protein kinase-like (PK-like) 76 450 IPR011009 -
Spst9g00624 1100 Pfam Protein kinase domain 94 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00624 1100 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00624 1100 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00624 1100 Pfam Protein kinase C terminal domain 419 463 IPR017892 GO:0004674|GO:0005524|GO:0006468
Spst9g00624 1100 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst9g00624 1100 SMART pkinase_C_6 401 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst9g00624 1100 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00624 1100 ProSitePatterns PPM-type phosphatase domain signature. 837 845 IPR000222 GO:0043169
Spst9g00624 1100 Gene3D Transferase(Phosphotransferase) domain 1 179 417 - -
Spst9g00624 1100 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 453 - -
Spst9g00624 1100 CDD MobB_NDR_LATS-like 27 88 - -
Spst9g00624 1100 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Spst9g00624 1100 Gene3D - 773 1100 IPR036457 -
Spst9g00624 1100 ProSiteProfiles PPM-type phosphatase domain profile. 786 1090 IPR001932 -
Spst9g00624 1100 SMART PP2C_4 776 1088 IPR001932 -
Spst9g00624 1100 FunFam Protein phosphatase 2C 16 774 1100 - -
Spst9g00624 1100 CDD STKc_NDR_like 91 464 - -
Spst9g00624 1100 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Spst9g00624 1100 Pfam Protein phosphatase 2C 827 1083 IPR001932 -
Spst9g00624 1100 CDD PP2Cc 788 1090 IPR001932 -
Spst9g00624 1100 Gene3D Phosphorylase Kinase; domain 1 84 178 - -
Spst9g00624 1100 SUPERFAMILY PP2C-like 782 1091 IPR036457 -
Spst9g00624 1100 FunFam Non-specific serine/threonine protein kinase 177 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00624 Spst-Chr9 5458517 5474767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00624 1 506 AGC Kinase Gene Family AT4G33080 79.608 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Spst9g00624 PP2C 1.1e-65 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00624 K08790 - gmx:100815717 984.171