Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00618 ATGGTTCACAATGTTGTGGAATGCAGTCTAAAAAAATTTAAACCCTATCAGTATCAGGATATACCAACAGCCATGATGAAATCAGCCCCAGATTACTGCTCTGTGTACGTAATTTCCAAATTGAAGATTATGTCTGCTCGATCAGCGGTACGGTCATTGTCAAAAACTCTTGCCTTACCGAAATCAGGTTCTCTGCTGGCAAGTCCACCTACTGAACCAGAAGGTGGACCAGTAAGGGGACAGCCACCTAGAAGTCGGGGCAATTACGAAGGAGCAGCAGAACCAAAGGTAAGAGATAGGCCAAGGAGTGCGGGAAGTAGTATGTCAATAGAAAACATTGATATAAACACTCGTCCACGACATTGGTCAATGGATGATAGAGAAATTTCAGGGATTGTGGATGTGAGTAAACTTGATCCTGGAGTATCAGATTCCTTCGGGATGACATCTCCTCAATCCTCGAAAGAACTTGAAGCTGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAACCAGGCGGAAGAGATTCGTCAATGGAAACGGGAAGAGGATCGCAAGGTTGAGGAAGCGAGGTTGTCTGAAGAGGCAGCTCTTGCAATTGCGGAAAAGGAGAAGGCTAAAGCCAAAGCTGCAATGGAAGCAGCTGAGGAGGCCAGGAAAAGGGCTGAACAGGAAGCACAGAGAAGAAAGGATGCAGAGATGAAGGCCAGGAGAGAGGCAGAAGAGAAAGAACGAGCATTATCTGCGTTGGCTCAAAATGATACCCGGTATAGAAAATACACCATAGAGGAGATTGAAATAGCAACAGAAAAGTTCTCCCCATCAAACAAAATTGGCGAAGGTGGATATGGACCAGTGTTTAAAGGCCACCTTGATCACACCCCGGTTGCAATCAAAATTCTAAGGCCTGATGCTTCTCAGGGCATGAAGCAGTTCCAACAAGAGATTGAGGTACTAAGCTGCATTAGACATCCGAATATGGTCCTTCTCCTTGGTGCATGTCCTGAGCATGGATGCTTGGTGTATGAATACCTGGATAATGGTAGCTTAGAAGATAGATTGTTCCGGAAAAACAACAGCAGGCCAATTTCATGGAGGAAACGGTTCCAAATATGTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAAACAAGCCAGAACCTATTGTGCACCGAGACCTCAAACCATCCAACATTCTTGTGGACAGGAATTACGTGAGTAAAATCAGTGATGTTGGTCTTGCACGTTTAGTCCCTCCTTCTGTAGCTGATAGTGTGACACAATATTACATGACTTCGGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACGGGAATGCTAACAACAAAGTCAGATATATATTCCCTGGGGATAATGCTACTCCAGATAATCACAGCCAAGCCTCCCATGGGCCTTGCTCACCAAGTTAGGAAGGCAATTGAAAAGGGCAGGTTTGAAGAAATGCTGGACCCTGTGATCACAGATTGGCCAGTGGAAGAGGCTCTATCATATGCCAAATTAGCATTGCAGTGTGCCGAACTTAGCAAGAAGGACAGACCAAATCTTGCAACAGAAGTTTTGCCAGAGCTTTACAGATTAAGCGAACTTGAATTTACTCCACAGAATGATCGAGTTTCTCTTGGCACTGATGATACGCTCTACAGCTATGACACGCGTCCTCTCACACCCCCACAAAGTCAATACTCAGACTGA 1776 0.4493 MVHNVVECSLKKFKPYQYQDIPTAMMKSAPDYCSVYVISKLKIMSARSAVRSLSKTLALPKSGSLLASPPTEPEGGPVRGQPPRSRGNYEGAAEPKVRDRPRSAGSSMSIENIDINTRPRHWSMDDREISGIVDVSKLDPGVSDSFGMTSPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEEIRQWKREEDRKVEEARLSEEAALAIAEKEKAKAKAAMEAAEEARKRAEQEAQRRKDAEMKARREAEEKERALSALAQNDTRYRKYTIEEIEIATEKFSPSNKIGEGGYGPVFKGHLDHTPVAIKILRPDASQGMKQFQQEIEVLSCIRHPNMVLLLGACPEHGCLVYEYLDNGSLEDRLFRKNNSRPISWRKRFQICAEIATALLFLHQNKPEPIVHRDLKPSNILVDRNYVSKISDVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITAKPPMGLAHQVRKAIEKGRFEEMLDPVITDWPVEEALSYAKLALQCAELSKKDRPNLATEVLPELYRLSELEFTPQNDRVSLGTDDTLYSYDTRPLTPPQSQYSD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00618 591 Gene3D Phosphorylase Kinase; domain 1 256 360 - -
Spst9g00618 591 SUPERFAMILY Protein kinase-like (PK-like) 271 548 IPR011009 -
Spst9g00618 591 PANTHER OS02G0152300 PROTEIN 14 558 - -
Spst9g00618 591 Gene3D Transferase(Phosphotransferase) domain 1 361 569 - -
Spst9g00618 591 Coils Coil 154 174 - -
Spst9g00618 591 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 261 360 - -
Spst9g00618 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Spst9g00618 591 Pfam Protein kinase domain 291 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00618 591 ProSiteProfiles Protein kinase domain profile. 288 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00618 591 MobiDBLite consensus disorder prediction 570 591 - -
Spst9g00618 591 FunFam U-box domain-containing protein 51 361 560 - -
Spst9g00618 591 MobiDBLite consensus disorder prediction 231 262 - -
Spst9g00618 591 MobiDBLite consensus disorder prediction 61 108 - -
Spst9g00618 591 SMART serkin_6 288 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00618 591 Coils Coil 185 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00618 Spst-Chr9 5426243 5429093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00618 11 557 Receptor kinase-like Gene Family AT5G12000 60.517 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst9g00618 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00618 - - gmx:100798861 871.692