Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00610 ATGGGTGCCTCAGGAAAATGGGTAAAGGCTTTAATCGGACTCAAGAAAACAGACAAAGACGAACATGTGAAAGAGGGTGGCAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCCTCTGGGGATATGGGCTCTTGGAAGGGTTTCAAAGGAAACCACCAGAAAGCAGCTTCTGAAGGGTCTGATTCTCCACCTCTTGTAGCAGCAGATGCTTACACAGCCGCAGTAGCGACTGTGGTTCGAGCTCCACCTAAGGATTTCAGACTCGTCAAACAAGAATGGGCCACTATAAGAATCCAAACTGCTTTCCGTGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTGCGGGGGAGACAGGTGAGGAAACAAGCTGCAGTGACATTGAGGTGCATGCAAGCCTTGGTACGGGTTCAGGCCCGTGTAAGAGCTCGTCGTGTGAGGATGTCCATAGAGGGGCAAGCTGTGCAGAACATGCTTAATGAAAGGCGCAGTAAGCTTGAACTTTTGAAGCAAGCTGAGAATGTGCAGGAAGGATGGTGTGACAGCAGAGGGACGTTGGAGGACGTTAAAGCAAAGATACAGATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATTGCTTACTCTCTTGCTCAAAAGCAATGCAGATCAACCCCAAGTAATTCACGAACTGATGGCACTTTTTCCTCTCTGAAGAGTCATGAGATTAACAAAGCTAACTGGGGGTGGAACTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCTCAGGCAGAAGCCTTTTTAGATAAAACCCCACCTCCAAAGAAGTTTGAGGAATCCTTTGTCAGCTCTAATTCCAAACCATGTTTAGTCAAAGTCAAGAAGAACAACATGACAACAAGGGTTTCTGCTAGGCCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGTTCTGCATCTTCTTCCATTTGTACATCTACAACGCCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGTAATGGTAATGTTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCTAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTCAAGAGGGCAGCGGTTTTCTCTAATGGAGATTCCAAAAGCACTGCAGGTTCTGACCCTTCAATAAACTCTTCTACGCCACTTCACGTGGACAAGAGCTCAGTGAGGCCACGGTGA 1305 0.4682 MGASGKWVKALIGLKKTDKDEHVKEGGKSKKWRLWRSSSGDMGSWKGFKGNHQKAASEGSDSPPLVAADAYTAAVATVVRAPPKDFRLVKQEWATIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRSKLELLKQAENVQEGWCDSRGTLEDVKAKIQMRQEGAFKRERAIAYSLAQKQCRSTPSNSRTDGTFSSLKSHEINKANWGWNWLERWMAAKPWESRLMEQSQAEAFLDKTPPPKKFEESFVSSNSKPCLVKVKKNNMTTRVSARPSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSNGNVVARPNYMNLTQSTKAKLKTSSNHVYNRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGSDPSINSSTPLHVDKSSVRPR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00610 434 MobiDBLite consensus disorder prediction 333 358 - -
Spst9g00610 434 Coils Coil 164 184 - -
Spst9g00610 434 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Spst9g00610 434 MobiDBLite consensus disorder prediction 405 434 - -
Spst9g00610 434 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Spst9g00610 434 MobiDBLite consensus disorder prediction 405 427 - -
Spst9g00610 434 PANTHER IQ-DOMAIN 5-RELATED 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00610 Spst-Chr9 5373515 5375473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00610 1 434 IQD Protein Family AT2G26180 59.276 2.11e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00610 - - gmx:100799714 682.945