Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00609 ATGTTCACCCTGCTGGCTTTGATAGTAGGATTGTTGGTATATCTGTATGCACCGTATTGGGGTGTAAGGAAGGTTCCAGGCCCACCATCTCTGCCTCTTGTAGGACACCTTCCCTTGCTGGCTAAGTATGGTCCTGATGTGTTCTCAGTCCTTGCCAAGCAATATGGTCCAATTTACAGATTCCATATGGGAAGACAGCCACTGATAATTATAGCAGATGCAGAGCTTTGTAAGGAAGCTGGAATTAAAAAATTCAAAGATATTTCAAACAGAAGTATTCCTTCTCCAATTTCTGCTTCTCCTCTTCACCAAAAGGGCCTCTTCTTCAGCAGAGACTCACAATGGTCTACCATGAGAAACACTATATTGTCAATGTACCAACCATCATATTTATCAAGATTAGTGCCAATGATGCAGTCTTTCATAGAATCTGCGACCCAAAACCTGGACTCTCAAAAGGAAGACGTTGTTTTTTCCAACTTGTCCTTGAGACTTGCTACTGATGTGATTGGACAAGCAGCATTTGGTGTGAACTTTGGACTTTCCAGACCTCATTCAGTTTGTGATTCTATCAAGAGTGTTAACAGTGACCATACAAATGACAATGAAGTATCGGATTTCATCAACCAACACATATATTCCACTACACAACTTAAGATGGACTTGTCTGGTTCCTTATCCATTATACTGGGTCTGCTTGTGCCAATACTTCAAGAACCATTTAGGCAGATTCTAAAGAGAATTCCAGGAACCATGGACTGGAAGATTGAGCGTACAAACCAAAAACTAAGTGGACGTCTTGATGAGATAGTGGAAAAAAGAATGAAAGATAAGAGCCGAAGTTCAAAGGATTTCTTGTCTCTCATACTTAATGCTAGAGAAACAAAAGCAGTTTCAGAGAATGTATTCACACCCGATTACATCAGTGCTGTTACTTACGAGCATCTACTTGCAGGTTCAGCAACCACGTCCTTTACCTTGTCTTCTGTTATCTATTTGGTTGCTGGACATCCTCAAGTCGAGAAAAAATTGCTTCAAGAGATAGATGGATTTGGTCCCGTAGATCAAATTCCCACTTCTCAAGATCTTCATGACAAGTTTCCTTATCTTGACCAGGTGATCAAAGAGGCAATGAGATTTTACACTGTATCTCCATTAGTTGCAAGAGAAACATCAAGTGAAGTGGAGATTGGAGGCTATCTTCTTCCAAAGGGGACTTGGGTGTGGTTAGCACTTGGAGTTGTAGCAAAAGATCCCAGAGATTTTCCAGAACCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTAAACAATTTTCCCTGCAAGAGATAAAGCTTTCTCTCATTCATTTATATCGGAAATACTTGTTTCGGCATTCGCCCAATATGGAAAACCCACTGGAACTCCAGTACGGGATAGTCCTTAACTTCAAGCATGGGGTCAAGCTCAGAGCCATAAAAAGAACATACAGTTGCTAA 1551 0.4101 MFTLLALIVGLLVYLYAPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDISNRSIPSPISASPLHQKGLFFSRDSQWSTMRNTILSMYQPSYLSRLVPMMQSFIESATQNLDSQKEDVVFSNLSLRLATDVIGQAAFGVNFGLSRPHSVCDSIKSVNSDHTNDNEVSDFINQHIYSTTQLKMDLSGSLSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVEKRMKDKSRSSKDFLSLILNARETKAVSENVFTPDYISAVTYEHLLAGSATTSFTLSSVIYLVAGHPQVEKKLLQEIDGFGPVDQIPTSQDLHDKFPYLDQVIKEAMRFYTVSPLVARETSSEVEIGGYLLPKGTWVWLALGVVAKDPRDFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGKQFSLQEIKLSLIHLYRKYLFRHSPNMENPLELQYGIVLNFKHGVKLRAIKRTYSC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00609 516 FunFam Cytochrome P450 3A4 12 515 - -
Spst9g00609 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Spst9g00609 516 Gene3D Cytochrome P450 13 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PANTHER THROMBOXANE-A SYNTHASE 2 513 - -
Spst9g00609 516 SUPERFAMILY Cytochrome P450 18 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 165 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00609 516 Pfam Cytochrome P450 26 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00609 Spst-Chr9 5366660 5373008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00609 63 512 Cytochrome P450 AT2G26170 74.889 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00609 K20771 - gmx:100797803 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00609 9 5366660 5373008 Spst9g00609 9 5366660 5373008 ECH