LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst9g00603	ATGATTTTTACCGAGGATCTGTGGCTACTGCTCCACCAACTCCTTCCAAAAACTTCTTTCTTCTCAGAAAAACCGTCCTTCTACCAGAACTTTCGGGAATCGATGATGAACTCGACCTGCGTAGGCGCTGAGTTAGACCAGTGCCGGGACGAGTCAGCGGCATTGGTTCTCAAATGCGTCGCCATCGCCTCCATTCTCCTGGCTGGCATGGCCGGAATCGCGATCCCCCTCGTCGGGAAACACCGCCGCTTCCTCCGCACCGATGGCAACCTCTTCGTGGCTGCCAAGGCCTTCGCCGCAGGCGTGATTCTGGCGACGGGATTTGTCCACATGCTCTCTGATGCCACCGAAGCGCTCCAACACCCGTGCCTGCCTTCCTTCCCGTGGTCCAAGTTTCCCTTCACCGGCTTCTTCGCCATGATGGCCGCGCTCTTCACGCTCCTTCTCGATTTCGTGGGAACGCAATACTACGAGCGGAAGCAGGGGCTCAACCGCGCAACGGAGGAGCAGTCGCGGGTCGGGTCATCCGAATCCGTATGGAAGGTGTTCGGAGAAGAAGAGAGCGGGGGAATGCACATCGTGGGGATGCATGCACATGCTGCGCATCATGGACATAACCACCCCCACGGCCATGACTCGTGTCATGGCATTGGCAGCGACAAGGAACAAGATGACGCTCATGCCCAGTCCCATGGACACGGACAGGGTCACTCCCACGCCCACGCCCACTCCAACATTCTAGAAGGAGAAGAAACCGACGTTCGTCACGTCGTGGTATCTCAGGTGTTGGAGCTTGGGATTGTGTCTCATTCGGTTATAATCGGGCTGTCTCTAGGGGTTTCTGAGAGTCCTTGTACCATAAGGCCTCTGATTGCGGCGTTATCTTTTCATCAGTTTTTTGAAGGGTTTGCGCTTGGAGGGTGCATTTCCCAAGCGCAGTTTAAAGCCTCCTCCGCGACCATAATGGCTTGTTTTTTTGCACTGACTACACCGTTGGGTGTTGCCATAGGTACGGCCATTGCTTCAGGGTTTAACCCTTACAGCCCCGGTGCACTCATCGCCGAAGGTATTCTCGATTCCTTCTCGGCGGGGATTTTGGTGTATATGGCTTTGGTAGATTTGATAGCTGCGGATTTTCTTAGCAAGAGAATGAGTTGTAACTTTAGGCTGCAGATAGTGTCTTACTGCATGCTTTTCCTTGGGGCTGGATTGATGTCTTCCCTTGCAATTTGGGCCTGA	1239	0.5424	MIFTEDLWLLLHQLLPKTSFFSEKPSFYQNFRESMMNSTCVGAELDQCRDESAALVLKCVAIASILLAGMAGIAIPLVGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDATEALQHPCLPSFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGLNRATEEQSRVGSSESVWKVFGEEESGGMHIVGMHAHAAHHGHNHPHGHDSCHGIGSDKEQDDAHAQSHGHGQGHSHAHAHSNILEGEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSESPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVAIGTAIASGFNPYSPGALIAEGILDSFSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA	412

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Spst9g00603	412	PANTHER	ZINC/IRON TRANSPORTER	54	405	-	-
Spst9g00603	412	MobiDBLite	consensus disorder prediction	201	242	-	-
Spst9g00603	412	Pfam	ZIP Zinc transporter	57	409	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
Spst9g00603	412	MobiDBLite	consensus disorder prediction	210	232	-	-
Spst9g00603	412	NCBIfam	ZIP zinc/iron transport family	42	412	IPR004698	GO:0005385\|GO:0016020\|GO:0071577

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst9g00603	Spst-Chr9	5311059	5312833	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst9g00603	37	412	Inorganic Solute Cotransporters	AT1G60960	68.895	3.05e-175	494

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst9g00603	K14709		-	gmx:100812212	631.328

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst8g02346	8	34576599	34579586	Spst9g00603	9	5311059	5312833	PCT

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