Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00599 ATGGGAATACCCAGAAAATGTTCATACTGTGGTAACTTAGGTCACAATTCAAGGACTTGTAAAACCACTCTCGCTCATCCACACCTGAAGCTCTTCGGAGTGCAACTTCACGTATCTTCTTCTTCTTCTTCTTCATCATCATCATCATCTGATTCTTTTTCTTCACCTTTGTATTCTGCCATGAAAACAAGTTTCAGCACCAACTACTTGTTCTCTTCGTCCCTACCCTCTTCCTCTCCTTCCCTGCTCGATGCTGCCAGCCTCATATCAACAATCCAAGGCACAAAAAAAGGTGTGGCATGGACAGAGGAGGAGCACAGAGTATTTCTTTTAGGGCTTGAGAAGCTGGGGAAGGGAAACTGGAGAGGCATATCTAAAAGTTTTGTGAAAACAAGAACACCTATACAAGTAGCCAGTCATGCACAAAAATATTTTCTCCGTCAATCTCACAACGTCTCCAACAAAAGAAAACACCGTCCCACTCTGTTCCATTGGGTTTCGCATCCTCATTCGGTGCTGAATTGGCCTTTCCCTTCAACTTCATCTTCGACTAATTGCACTGTTGAGATGGCAGCCCCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGGAGATAGCAGATTCATGCCTCTCTAGTTGA 645 0.4403 MGIPRKCSYCGNLGHNSRTCKTTLAHPHLKLFGVQLHVSSSSSSSSSSSSDSFSSPLYSAMKTSFSTNYLFSSSLPSSSPSLLDAASLISTIQGTKKGVAWTEEEHRVFLLGLEKLGKGNWRGISKSFVKTRTPIQVASHAQKYFLRQSHNVSNKRKHRPTLFHWVSHPHSVLNWPFPSTSSSTNCTVEMAAPDLELKLATPTPLEIADSCLSS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00599 214 PANTHER TRANSCRIPTION FACTOR KUA1 5 169 - -
Spst9g00599 214 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Spst9g00599 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Spst9g00599 214 SMART sant 97 147 IPR001005 -
Spst9g00599 214 NCBIfam myb-like DNA-binding domain, SHAQKYF class 96 148 IPR006447 GO:0003677
Spst9g00599 214 CDD SANT 100 145 IPR001005 -
Spst9g00599 214 Pfam Myb-like DNA-binding domain 100 145 IPR001005 -
Spst9g00599 214 FunFam transcription factor MYB1R1 99 150 - -
Spst9g00599 214 ProSiteProfiles Myb-like domain profile. 101 145 IPR001005 -
Spst9g00599 214 Gene3D - 101 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00599 Spst-Chr9 5291062 5291915 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst9g00599 Myb_DNA-binding 3.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00599 - - gmx:100806176 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00599 9 5291062 5291915 Spst9g00599 9 5291062 5291915 ECH