Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00587 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGGAGCGCCTGAAGAAGCTCGTGATGAAAATGTATTAGTACTGTTTGAAGCAACCAAGGTTCTAAGGGGACTTTGCTCTGCTTACACTAAACAAGGTAGCAAAGGATTCAACCAAGATGCTGCAACCCTTTGTCAGGGTTATGGGACAACAAACGTAGCATTTTGTGGTGTTTTTGATGGGCATGGAAGGAATGGTCACATAGTGAGCAAAATAGTAAATAGCCGTTTGTGTCCACTCATACTGAACCAAAAGAAAGTGCATGCAAAGATTGATAAAAGGAACATCCGAAACCATGTGGGCACTGTTGAAGACGACTCATCGGCTATACTAAACAAGAATTTTGAGGAATGGAAAGAAGCCATTCTTGATGGTTTCAGGGTGATGGACAAGGAGGTGAAGCTACAAGAGAATCTGGACTGCTCTTGCAGTGGAACTACGGCTGTAGTTGTCATAAGACAGGGTGAGGATCTTGTCATAGCTAACCTTGGTGACTCAAGAGCAATCATGGGGACCATCTCCGAGGGTGAAATCATGCCCATTCAATTGACCACGGATATGAAACCTGGATTACCTTGCGAATCAGAACGGATAAGAAGTTGCAACGGCCGTGTATTTGCGTTGAAGGAAGAACCACACATCCAACGAGTGTGGTTACCCAATGAGAACTCCCCAGGTCTAGCCATGTCTCGGGCTTTTGGAGATTTCATGCTAAAAGACCACGGTATCATTGCCATCCCAGATATTTCGCATCGCACCCTGACATCTAGCGACCAATTTATTGTTCTTGCAAGTGATGGGGTGTGGGATGTTCTGAGCAACAAGGAGGTTTCCTCAATTGTGTGGGCAGCAGATACTGAAAAAGAAGCAGCAAGGGCTGTGGTGGAAGCAGCAACTTTAGCATGGAAAAACAAGTATCCATCTTCTAAGGTAGATGACTGCACTGTGGTTTGCCTCTTTCTCCAGAAGAAACCACAGTTCCTCCCTGTCAAAAATGGAAATCCCTGA 1044 0.4502 MGICISSESSAIHGAPEEARDENVLVLFEATKVLRGLCSAYTKQGSKGFNQDAATLCQGYGTTNVAFCGVFDGHGRNGHIVSKIVNSRLCPLILNQKKVHAKIDKRNIRNHVGTVEDDSSAILNKNFEEWKEAILDGFRVMDKEVKLQENLDCSCSGTTAVVVIRQGEDLVIANLGDSRAIMGTISEGEIMPIQLTTDMKPGLPCESERIRSCNGRVFALKEEPHIQRVWLPNENSPGLAMSRAFGDFMLKDHGIIAIPDISHRTLTSSDQFIVLASDGVWDVLSNKEVSSIVWAADTEKEAARAVVEAATLAWKNKYPSSKVDDCTVVCLFLQKKPQFLPVKNGNP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00587 347 PANTHER PROTEIN PHOSPHATASE 38 331 IPR015655 GO:0004722|GO:0006470
Spst9g00587 347 Gene3D - 23 336 IPR036457 -
Spst9g00587 347 Pfam Protein phosphatase 2C 62 309 IPR001932 -
Spst9g00587 347 ProSiteProfiles PPM-type phosphatase domain profile. 37 333 IPR001932 -
Spst9g00587 347 CDD PP2Cc 38 333 IPR001932 -
Spst9g00587 347 SMART PP2C_4 27 331 IPR001932 -
Spst9g00587 347 SUPERFAMILY PP2C-like 31 334 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00587 Spst-Chr9 5240040 5241723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00587 1 338 PP2C-type Phosphatase Gene Family AT5G26010 50.720 1.05e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00587 - - gmx:100795893 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00587 9 5240040 5241723 Spst9g00587 9 5240040 5241723 ECH