Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g00573 | ATGGTCTTTGACATCTCTCACCCAGGGCTTCGACTTGGTCTTGGTCTTGGTCTTGGCCTGCAAGACCAGTCGCAAGAAACTTGCTTGAAGAGCGATGAACAAAGGCAAAGACGAGGCCAGAAGAAAAAGGAAGCGGATCCACGTAACAAGGCTTACCCATCGCTTAGGTTAGGACCACCCCATCATGAGGCAAATAATAATCATCAAGTTACAAAGACTGAATCTGATGAATATCATAATATACAGCCTCGTGCCTCTTCTCCAAGTGCAGTGTCTTCGTTTTCTAACTCATCAAGCATCATCAAGAGAGAGAGAGATCAGTTCGCGGGCGAAGAACTTGAGCTAGAGATAGACAAGTTTCCCTCACACTTCAGGGTTGTGGATCTTGATGAAAATGGTTACCCCAAGAAGAAACTTAGGCTCAACAAAGAACAATCTGCAGTCTTGGAAGATAGCTTCAAGGAGCATTCTACTCTCACTCCGATACAGAAGCAAGAATTGGCAAATAAACTGAATCTGCGGGCGAGACAAGTGGAGGTATGGTTTCAGAACAGGAGAGCCAGGACAAAACTGAAACAAACGGAAGTGGACTGTGAGTTACTGAAAAAGTGCTGCGAAAGTCTAACAGAGGAGAACAAGATGCTGCAAAAAGAGTTGGAAGAGCTTAAATCGATGAAAACAGCATTGCAGGGACCCATTTTTATGCAGCTTCCAGTGGCAACCCTTACAATATGCCCTTCCTGTGAAAGAATTTGCGGTGGCAGCAGCGCCACCAACAACAATGGTTCCTCTCCCACCACCACCACTGCTTTGCTTGTGGGCCCAAAGCCCCATCATGATCACCACTTCTACAAAAATAACTACACATTCACACAGCCATCTGCAGCTTGCTAG | 894 | 0.4586 | MVFDISHPGLRLGLGLGLGLQDQSQETCLKSDEQRQRRGQKKKEADPRNKAYPSLRLGPPHHEANNNHQVTKTESDEYHNIQPRASSPSAVSSFSNSSSIIKRERDQFAGEELELEIDKFPSHFRVVDLDENGYPKKKLRLNKEQSAVLEDSFKEHSTLTPIQKQELANKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCESLTEENKMLQKELEELKSMKTALQGPIFMQLPVATLTICPSCERICGGSSATNNNGSSPTTTTALLVGPKPHHDHHFYKNNYTFTQPSAAC | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g00573 | 297 | Pfam | Homeodomain | 136 | 190 | IPR001356 | GO:0003677 | |
Spst9g00573 | 297 | CDD | homeodomain | 135 | 193 | IPR001356 | GO:0003677 | |
Spst9g00573 | 297 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 13 | 267 | - | - | |
Spst9g00573 | 297 | ProSiteProfiles | 'Homeobox' domain profile. | 132 | 192 | IPR001356 | GO:0003677 | |
Spst9g00573 | 297 | Pfam | Homeobox associated leucine zipper | 192 | 226 | IPR003106 | GO:0006355|GO:0043565 | |
Spst9g00573 | 297 | Coils | Coil | 191 | 228 | - | - | |
Spst9g00573 | 297 | MobiDBLite | consensus disorder prediction | 25 | 94 | - | - | |
Spst9g00573 | 297 | Gene3D | - | 130 | 197 | - | - | |
Spst9g00573 | 297 | MobiDBLite | consensus disorder prediction | 28 | 50 | - | - | |
Spst9g00573 | 297 | SMART | HOX_1 | 135 | 196 | IPR001356 | GO:0003677 | |
Spst9g00573 | 297 | SMART | halz | 192 | 235 | IPR003106 | GO:0006355|GO:0043565 | |
Spst9g00573 | 297 | SUPERFAMILY | Homeodomain-like | 128 | 193 | IPR009057 | - | |
Spst9g00573 | 297 | ProSitePatterns | 'Homeobox' domain signature. | 167 | 190 | IPR017970 | GO:0000981|GO:0006355 | |
Spst9g00573 | 297 | MobiDBLite | consensus disorder prediction | 80 | 94 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g00573 | Spst-Chr9 | 5151587 | 5154040 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g00573 | 130 | 297 | Homeobox Transcription Factor Family | AT4G37790 | 60.000 | 1.74e-57 | 184 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Spst9g00573 | Homeodomain | 4.2e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g00573 | K09338 | - | gmx:100790927 | 354.369 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst9g00573 | 9 | 5151587 | 5154040 | Spst9g00573 | 9 | 5151587 | 5154040 | ECH |