Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00559 ATGTTGCTCCACGAAGAGGTTCAGTTGCCATGTTCTCCTGTTCACGAAATCATGCTGACCGAAACTGAAATAGAGGACTTGTTTTCTCTCATGAACCAATCGAGAGACCTGGCCAGCCCGGGGTCCGGTTCACAGGGATCGAACCGGGCGGTTTACTCGCCAGAGGAAAGAAAGCTGAGACGCATGCAATCGAACCGTGAATCGGCTAGAAGGTCCCGCTGCAGAAAGAAGAAGCATCTTGAGAATCTGACGAGCCAACTGAACCGGTTGAGACTCCAAAACCGTTTTCTCAGAAACCGACTCTCCTTAACCATGCACCACCACCTTCTACTATCCCTACATAACGATCATCTTAAATCCGAAGCTATTGCTCTCATGGCCTCTCTTTCTGATCTATGTCTAGGAAGAGGAAAACATGGTTACGTACGTGCAGTGTAG 438 0.4886 MLLHEEVQLPCSPVHEIMLTETEIEDLFSLMNQSRDLASPGSGSQGSNRAVYSPEERKLRRMQSNRESARRSRCRKKKHLENLTSQLNRLRLQNRFLRNRLSLTMHHHLLLSLHNDHLKSEAIALMASLSDLCLGRGKHGYVRAV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00559 145 MobiDBLite consensus disorder prediction 53 69 - -
Spst9g00559 145 Coils Coil 80 100 - -
Spst9g00559 145 SMART brlzneu 53 124 IPR004827 GO:0003700|GO:0006355
Spst9g00559 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Spst9g00559 145 FunFam BZIP transcription factor 55 106 - -
Spst9g00559 145 MobiDBLite consensus disorder prediction 35 51 - -
Spst9g00559 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 38 132 - -
Spst9g00559 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 102 IPR004827 GO:0003700|GO:0006355
Spst9g00559 145 CDD bZIP_plant_GBF1 58 100 IPR045314 GO:0003700|GO:0006355
Spst9g00559 145 SUPERFAMILY Leucine zipper domain 57 111 IPR046347 GO:0003700|GO:0006355
Spst9g00559 145 MobiDBLite consensus disorder prediction 35 75 - -
Spst9g00559 145 Gene3D - 55 107 - -
Spst9g00559 145 Pfam Basic region leucine zipper 54 102 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00559 Spst-Chr9 4957444 4958178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00559 9 132 bZIP Transcription Factor Family AT4G37730 40.625 1.91e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst9g00559 bZIP_2 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00559 - - ccaj:109788674 190.66