Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00549 ATGGCGCTAATTCACAGCACAGAGCTTCTACTTCTCCTAATTCTCTTCCTCGTTTCATCGAAGCTTGCAACATCTCACTCCACAGTGCGCTTCCTTCCTGGTTTCCAGGGACCCCTTCCTTTTCAACTTCGAACTGGGTACGTGGAAGTGGGTGAAAGTGATGCAGAGGAGCATGCAGAACTCTTCTACTACTTTATTGAGTCCGAGAATGATCCTGAAGGAGACCCTCTCCTTCTCTGGCTAACCGGGGGCCCAGGTCCACTGGCATTTAAAAACGAGGAATACACTGGTGGCTTACCTAATTTGACTTTGAAGCCAGAATCATGGACAAAGGTAAGTAGCATTATATTTGTGGATCTGCCAGCGGGTACAGGCTTCTCTTATCCCAAAACAGAAAGTGATGTTCATCAAAGTACCACCAAGCTAGTTCGCCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCGAAATTTCTCTCAAATGAGGTGTACATTGCTGGCGACTCATACAGTGGCCTTCCTATACCAGTTATTGTTCAAGAAATTTCATACGGAAACGAAGGTGGTATCCAACCATGGATAAATCTCCAGGGATACCTGCTGGGAAATCCCTCAACAACATCAGCTGAAAAAAACTACGAAATACCGTTTAATCATGGAATGGCATTCGTTTCCGATGAACTCTACGAGTCTATTTCAGGAATTAATACTGGGCATGTTTTGGAACCCTATTGTGAGGAGCCTGGTCTGCATAAACCGATGGAAGACACTTGGAGTTGGAGGAGGTCTCTTGCTCATGAAACCTCTCCTCTCACATTGCCACCCTTAAGTTGTAGGGCTCGTGCATATGTTCTGTGTACCTATTGGGCCAACGATGATAATGTTCACAAAGCACTGCATATTCGGAAGGGAAGTATAGGGAAATGGAAGCGGTGTAACTCTGGCATACCTTTTAAGTTTGATGTCCCTAGCAGCTTCCAATATCACGTAAATCTCAGCAGAAAAGGCTACCGTTCATTAATATACAGTGGGGATCATGACATGATAGTTCCATTTTTGTCTACTCAAGCGTGGATAAGAGCTTTAAACTATTCCATCGTGTCTGACTGGAGGCAGTGGTATTACAATGGCCAAGTAGTAGGATACACGAGGACATACTCAAATGGGATGACATTTGCAACTGTGAAGGGTGCAGGGCATACAGCTCCGGAGTACAAACCTGAAGAATGTTTAGGCATGTTTAGGAGATGGATATCAAATAGGCCTCTTTAA 1278 0.4444 MALIHSTELLLLLILFLVSSKLATSHSTVRFLPGFQGPLPFQLRTGYVEVGESDAEEHAELFYYFIESENDPEGDPLLLWLTGGPGPLAFKNEEYTGGLPNLTLKPESWTKVSSIIFVDLPAGTGFSYPKTESDVHQSTTKLVRHAHQFLRKWLIDHPKFLSNEVYIAGDSYSGLPIPVIVQEISYGNEGGIQPWINLQGYLLGNPSTTSAEKNYEIPFNHGMAFVSDELYESISGINTGHVLEPYCEEPGLHKPMEDTWSWRRSLAHETSPLTLPPLSCRARAYVLCTYWANDDNVHKALHIRKGSIGKWKRCNSGIPFKFDVPSSFQYHVNLSRKGYRSLIYSGDHDMIVPFLSTQAWIRALNYSIVSDWRQWYYNGQVVGYTRTYSNGMTFATVKGAGHTAPEYKPEECLGMFRRWISNRPL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00549 425 Gene3D alpha/beta hydrolase 35 425 IPR029058 -
Spst9g00549 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Spst9g00549 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 128 IPR001563 GO:0004185|GO:0006508
Spst9g00549 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 392 405 IPR001563 GO:0004185|GO:0006508
Spst9g00549 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 117 IPR001563 GO:0004185|GO:0006508
Spst9g00549 425 FunFam Carboxypeptidase 328 422 - -
Spst9g00549 425 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 409 IPR001563 GO:0004185|GO:0006508
Spst9g00549 425 Pfam Serine carboxypeptidase 33 422 IPR001563 GO:0004185|GO:0006508
Spst9g00549 425 SUPERFAMILY alpha/beta-Hydrolases 29 424 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00549 Spst-Chr9 4884250 4889441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00549 23 52 Calmodulin-binding Proteins AT2G22960 60.000 6.32e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00549 K16296 - gmx:100801015 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00549 9 4884250 4889441 Spst9g00549 9 4884250 4889441 ECH