Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00532 ATGAAGGTCTATGCCATTGATGGATCTCGTGGAACATCGAAAGTTCTTATGAGTGAACAAGTTTTCTCAGTTTATTTGTTGAAAGAGAAATGGACATGTTTGACTGGTCAAGCTATCATCCTCAGGATTGTTTCTTCTTCCGGACCCTCCGTCATGCCTTCAATTAAAAGCCCGGCCCGCTTCTTAGACTTCAGCTTCAGGGGCAGGGGCCACACACAATTTAACCCGACCCGATCTGACCTAGACACGGGCTTGATGGGTTTTTGTTCTCCACGCGCCGTAGAAGCGCGTGATTCAGACAGTGGCACTCAAAAGGCAAAGACTTTATGGAGACGACCTTTTTCGCATTGTTGTTCGATTGGGTCGTCGAATCTCTTTTCAGAAAACTTTTTTGTTTCCCAAATGGATGATCTTTCGTCCAGCCTTCTATGCCAAGAAAACGAAACGTGGTTGGAAGAAGGAGGTGAAGAATCAGGATACCAATTGGATGGATCACGGCATGATTGTGGGGTTTCGGAGGATGAGTATGTGGGGATTTTGGTTGAGAGAGAAATCATTCTTGGGTTCAGAAGGGGAGAAACTTTGGTGCTCGGGGACTGGGTGAAACGCGCACGCATGGAAGCAATCAATTGGATTCTCAAAACAAGAGCGACATTGGGTTTTCGCTTCGAAACGGCTTATTTGTCAGTCACATACTTCGATCGATTTCTTTCCAGACGGTCCATTGATAGTGAAAAGTGTTGGGCAATTCGGTTGCTATCAATTGCATGTCTCTCTCTGGCTGCAAAGATGGAGGAATGTAATGTGCCAGGGCTATCAGAGTTCAAATTGGATGACTATTCCTTTGAGGGAAAAGTGATTCAGAAAATGGAGCTCTTGGTGCTCAGCACATTGGAGTGGAAAATGGGTATTGTCACTCCCTTTGATTTTCTTTCCTATTTCATCACAAAGTTCTCCACTGAATCCCCACCAAGTCCTACTTTTTCCAAGACCATGCAACTCATCTTCACCACAATGAAAGAGGTAAACTTAATGGATAAAAAACCATCAGTTATTGCAGCGGCTGCTACATTAGTGGCAATAGATCAAAAATTGACGATAGACGCAGTGGAGTTGAAGATGAGTTCAATTCCACAACATAGGCTTCTAGAGCCTAAAGATGTATTCGAGTACTACATTCTAATTCAAAGATTACAAGAAGAGGATACCAAAAGAGACACGCATACGCCAATAGACGTGACTGACAGCTCTCGAGTTACTTCTTCCGCAGCAACGGCGAAGAGAAGAAGACTCACATTCGGTGACCATGAAGGAAGTAGTCATGGGAAGGGACAAGGCTAG 1341 0.4437 MKVYAIDGSRGTSKVLMSEQVFSVYLLKEKWTCLTGQAIILRIVSSSGPSVMPSIKSPARFLDFSFRGRGHTQFNPTRSDLDTGLMGFCSPRAVEARDSDSGTQKAKTLWRRPFSHCCSIGSSNLFSENFFVSQMDDLSSSLLCQENETWLEEGGEESGYQLDGSRHDCGVSEDEYVGILVEREIILGFRRGETLVLGDWVKRARMEAINWILKTRATLGFRFETAYLSVTYFDRFLSRRSIDSEKCWAIRLLSIACLSLAAKMEECNVPGLSEFKLDDYSFEGKVIQKMELLVLSTLEWKMGIVTPFDFLSYFITKFSTESPPSPTFSKTMQLIFTTMKEVNLMDKKPSVIAAAATLVAIDQKLTIDAVELKMSSIPQHRLLEPKDVFEYYILIQRLQEEDTKRDTHTPIDVTDSSRVTSSAATAKRRRLTFGDHEGSSHGKGQG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00532 446 Gene3D - 202 303 - -
Spst9g00532 446 SMART cyclin_7 210 296 IPR013763 -
Spst9g00532 446 SUPERFAMILY Cyclin-like 288 377 IPR036915 -
Spst9g00532 446 PANTHER CYCLINS 173 379 IPR039361 -
Spst9g00532 446 SUPERFAMILY Cyclin-like 169 302 IPR036915 -
Spst9g00532 446 Gene3D - 304 363 - -
Spst9g00532 446 Pfam Cyclin, C-terminal domain 305 400 IPR004367 -
Spst9g00532 446 Pfam Cyclin, N-terminal domain 203 302 IPR006671 -
Spst9g00532 446 MobiDBLite consensus disorder prediction 413 427 - -
Spst9g00532 446 FunFam Cyclin-D5-1 200 303 - -
Spst9g00532 446 MobiDBLite consensus disorder prediction 404 446 - -
Spst9g00532 446 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Spst9g00532 446 CDD CYCLIN_AtCycD-like_rpt1 204 300 - -
Spst9g00532 446 CDD CYCLIN_AtCycD-like_rpt2 305 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00532 Spst-Chr9 4698852 4700985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00532 142 355 Core Cell Cycle Gene Families AT4G37630 40.444 1.07e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00532 K18811 - gmx:100780266 528.865