Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00531 ATGGATAGTTACCTGAGTGAGAATTTTGGGGATGTGAAAGCCAAAAACTCGTCGGAAGAAGCGCTTCAGAGATGGAGGAAGGCTTGTTGGCTTGTTAAGAACCACAAGAGGAGGTTTCGTTTCACTGCTAACCTCTCCAAGCGATTTGAGGCTGAAGCTATCAGACGCTCTAACCAGGAGAAATTCAGAGTTGCAGTGTTGGTTTCACAAGCTGCTCTTCAGTTTATTCATGGTCTAAATTTGTCAACTGAGTACACTGTACCCGAAGAAGTTAAAACTGCGGGCTTCGAAATTTGTGCTGATGAGTTGGGATCAATTGTCGAGGGACGTGATGTGAAGAAGTTGAAAATTCATGGTGGGGTTGAGGGTATCATAAACAAACTCAATACCTCAGTTGATGATGGTATATCAACTTCTGAGTACTTGCTGAATCAGAGGAAAGAAATTTATGGAGTTAATAAATTCATTGAAAGTCCACCACGCGGATTTTGGGTTTTTGTATGGGAAGCCCTTCAAGATACAACCCTCATGATACTTGCTGTCTGTGCCTTGATCTCTTTGGTGGTTGGTATAGTGATGGAAGGGTGGCCCAAGGGTGCGCAGGATGGAATTGGTATTGTTGCTAGCATATTGCTTGTAGTGTTTGTCACTGCCACAAGTGATTACAGACAATCACTTCAGTTTAAGGATCTAGATAAAGAGAAGAAAAAAATTACAGTTCAGGTTACGAGAAATGGTTGTAGGCAGAAGCTTTCAATATATGATCTGCTTCCTGGTGATATTGTACATCTAAATATTGGAGATCAGGTCCCTGCTGATGGGCTTTTTGTGTCTGGTTTCTCAGTGTTAATAAATGAATCAAGCTTAACAGGGGAAAGTGAACCAGTGAATGTCAGTGAACTTAATCCCTTTCTGCTGTCTGGAACCAAAGTCCAAGATGGATCATGCAAGATGCTAGTGACTACTGTTGGAATGAGGACCCAGTGGGGTAAACTAATGGCTACCCTAAGTGAAGGGGGAGATGATGAAACACCTTTGCAGGTAAAACTCAATGGTGTTGCTACCATTATTGGGAAAATAGGCCTCTTTTTTGCAGTTGTGACCTTTTCTGTGTTGGTCCAAGGACTACTTAGCCGCAAGCTACGAGAAGGATCCCAGTGGACATGGTCTGGTGATGATGCTATGGAAATTGTGGAATTCTTTGCTATTGCTGTTACTATTGTTGTTGTTGCGGTTCCCGAAGGCTTACCTTTAGCTGTTACATTAAGCCTTGCTTTTGCAATGAAAAAGATGATGAACGATAAGGCACTTGTTCGTCACTTGGCTGCTTGTGAGACAATGGGATCTGCCACTACCATCTGCAGTGACAAGACTGGCACACTAACTACTAACCATATGACTGTTGTAAAAGCTTACATATGTGGAAAGATTAAAGAAGTAAACAGTTCTAAGGCCTCTTCTGATTTCTCTTCTGATATTCATGATTCTGCTCTTGCAATTCTACTTGAATCAATATTTAAGAACACGGGAGGAGAAGTTGTCAAAAACAAAGATGAGAAGATTGAAATTCTGGGATCACCGACTGAGACTGCACTCTTGGAGTTCGGGCTGTCACTTGGCGGTGATTTCCTAAAAGAACGACAAAGGTCAAAACTTGTGAAAGTTGAGCCATTTAATTCTATAAAGAAGCGCATGGGGGTGGTTCTACAGCTTCCTGATGGTAGTTTCAGAGCACATTGTAAAGGTGCCTCTGAAATAATTCTAGCTGCATGTGACAAAGTTGTGGACTCAAGTGGTGAGGTTATTCCACTCAATGAAGACTCCATCAATCACTTGAATGATATGATTGAAACATTTGCTGGTGAAGCTCTCCGAACCCTTTGCCTTGCTTACATGGATATCCATGATGAGTTTTCTGTTGGAACTCCTATTCCTGCTAGGGGTTACACTTGTATAGGAATTGTGGGTATTAAAGATCCAGTTCGCCCTGGTGTTAGAGAGTCTGTTGCCATTTGTAGGTCAGCTGGTATTGCTGTTAGGATGGTCACCGGAGATAACATAAATACAGCAAAGGCAATTGCTAGAGAGTGTGGAATTTTAACGGATGGTATTGCAATTGAAGGCCCTGAGTTTCGTGAGAAGAGTGAGGAGGAATTGCTTGATATCATTCCTAAAATTCAGGTACATACATGTCATTTATTCGATTTTGTAATGGCCCGATCTTCACCCATGGATAAGCATACCCTGGTAAAACACTTGAGGACAACATTTCAAGAGGTTGTTTCGGTTACTGGTGATGGTACAAATGATGCTCCAGCACTTCATGAAGCAGATATTGGACTTGCAATGGGCATTGCCGGAACTGAGGTTGCGAAGGAAAGTGCTGACGTAATAATTCTAGATGATAACTTTTCCACTATTGTGACCGTAGCCAAATGGGGCCGCTCGGTCTACATAAACATTCAGAAATTTGTGCAGTTTCAGCTAACTGTTAATGTTGTTGCTTTGATAGTCAATTTCTCTTCTGCCTGTTTGACTGGAAATGCTCCCCTCACTGCTGTTCAACTCCTTTGGGTCAACATGATTATGGACACTCTTGGAGCACTTGCACTTGCAACTGAACCTCCTAATGATGAGTTGATGAAAAGACCACCTGTTGGTAGGAAAGGAAACTTCATCAGTAATGTGATGTGGAGGAACATCTTGGGGCAGTCTATGTATCAATTTGTCGTAATATGGTTCCTCCAGACTAGAGGAAAAGCAACATTTCATCTTCATGGCCCAGACTCTGATATGATATTGAATACCCTTATTTTCAACTCATTTGTGTTCTGTCAGGTTTTCAATGAGATTAGTTCCAGAGATATGGAGAGGATAAATGTGTTTGAAGGTATATTGAAGAATTACGTGTTCGTAGCTGTGCTTACTTGCACTGTGGTCTTCCAAATTATTATTGTTGAATTCTTGGGCACCTATGCAAACACATCTCCACTTAGTTTGAAGCAGTGGTTTGGTAGCGTTCTCTTTGGAGTCCTTGGCATGCCAATTGCAGCGGCTCTAAAGATGATCCCCGTGGGCTCTGTCTAA 3087 0.4195 MDSYLSENFGDVKAKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSTEYTVPEEVKTAGFEICADELGSIVEGRDVKKLKIHGGVEGIINKLNTSVDDGISTSEYLLNQRKEIYGVNKFIESPPRGFWVFVWEALQDTTLMILAVCALISLVVGIVMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITVQVTRNGCRQKLSIYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSELNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFSVLVQGLLSRKLREGSQWTWSGDDAMEIVEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYICGKIKEVNSSKASSDFSSDIHDSALAILLESIFKNTGGEVVKNKDEKIEILGSPTETALLEFGLSLGGDFLKERQRSKLVKVEPFNSIKKRMGVVLQLPDGSFRAHCKGASEIILAACDKVVDSSGEVIPLNEDSINHLNDMIETFAGEALRTLCLAYMDIHDEFSVGTPIPARGYTCIGIVGIKDPVRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTDGIAIEGPEFREKSEEELLDIIPKIQVHTCHLFDFVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFISNVMWRNILGQSMYQFVVIWFLQTRGKATFHLHGPDSDMILNTLIFNSFVFCQVFNEISSRDMERINVFEGILKNYVFVAVLTCTVVFQIIIVEFLGTYANTSPLSLKQWFGSVLFGVLGMPIAAALKMIPVGSV 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00531 1028 PANTHER CATION TRANSPORTING ATPASE 83 1025 - -
Spst9g00531 1028 Pfam Cation transporting ATPase, C-terminus 849 1023 IPR006068 -
Spst9g00531 1028 SUPERFAMILY Calcium ATPase, transduction domain A 238 334 IPR008250 -
Spst9g00531 1028 Gene3D - 464 660 IPR023299 GO:0000166
Spst9g00531 1028 FunFam Calcium-transporting ATPase 217 337 - -
Spst9g00531 1028 PRINTS H+-transporting ATPase (proton pump) signature 764 780 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g00531 1028 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g00531 1028 PRINTS H+-transporting ATPase (proton pump) signature 796 821 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g00531 1028 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1024 IPR023298 -
Spst9g00531 1028 Pfam Cation transport ATPase (P-type) 515 594 - -
Spst9g00531 1028 FunFam Calcium-transporting ATPase 649 809 - -
Spst9g00531 1028 Pfam E1-E2 ATPase 237 432 - -
Spst9g00531 1028 NCBIfam calcium-translocating P-type ATPase, PMCA-type 112 1025 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Spst9g00531 1028 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 665 IPR023299 GO:0000166
Spst9g00531 1028 FunFam Calcium-transporting ATPase 464 660 - -
Spst9g00531 1028 SUPERFAMILY HAD-like 452 869 IPR036412 -
Spst9g00531 1028 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Spst9g00531 1028 Gene3D - 143 337 - -
Spst9g00531 1028 NCBIfam HAD-IC family P-type ATPase 737 845 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g00531 1028 NCBIfam HAD-IC family P-type ATPase 395 493 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g00531 1028 Gene3D - 169 1023 - -
Spst9g00531 1028 Gene3D - 451 809 IPR023214 -
Spst9g00531 1028 Gene3D - 17 77 - -
Spst9g00531 1028 SFLD C1.7: P-type atpase like 436 816 - -
Spst9g00531 1028 Pfam Cation transporter/ATPase, N-terminus 119 186 IPR004014 -
Spst9g00531 1028 FunFam Calcium-transporting ATPase 781 1027 - -
Spst9g00531 1028 FunFam Calcium-transporting ATPase 17 77 - -
Spst9g00531 1028 PRINTS P-type cation-transporting ATPase superfamily signature 788 800 - -
Spst9g00531 1028 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Spst9g00531 1028 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Spst9g00531 1028 PRINTS P-type cation-transporting ATPase superfamily signature 764 783 - -
Spst9g00531 1028 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Spst9g00531 1028 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Spst9g00531 1028 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Spst9g00531 1028 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Spst9g00531 1028 SFLD p-type atpase 436 816 IPR044492 -
Spst9g00531 1028 CDD P-type_ATPase_Ca_PMCA-like 143 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00531 Spst-Chr9 4682710 4688788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00531 1 1027 Primary Pumps ATPases AT1G27770 80.545 0.0 1687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00531 K01537 - gmx:100810758 1897.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00531 9 4682710 4688788 Spst9g00531 9 4682710 4688788 ECH