Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g00530 | ATGTTAACCACCGTCAACAACGACCATTCCTTCTCCGCTTTCAGCGACTGCAACAGCGACAGATCCGGCGAATTCCCCACTCCCTCCTCCGAGAGCCGCCGCCTCCTCATCGCCTGCGCCGCCGACAATTCCGACGAGTTCATTACCCACCTTGTTGTCAACCTCCACTCCTGTTCCATTGAGGAGCAGAAGCAAGCCACCATGGAAATCAGGTTACTCGCCAAGAACAAGCAAGAGAACCGCGTCAAGATCGCAAAAGCCGGCGCGATTAAACCCTTGATTTCACTTTTATCCTCGTCGTCGGACCTTCAGCTCCAGGAGTACGTGGTGACCGCGATTCTCAATCTCTCCCTCTGCGACGAGAACAAAGAGCTGATCAATTCCTCTGGAGCGGTGAAGCCGCTCGTGGGGGCGCTGGAGACGGGGACGGCGACGGCGAAGGAGAACGCGGCGTGCGCGCTGCTACGCCTCTCGCAGAGAGAGGAGGACAAGTTGGCGATAGGGAGGGCGGGGGCGATTCCGCCTCTGGTGAGGCTTCTGGAAGGTGGGGGGTTGCGCGGGAAGAAGGACGCGGCGACGGCGCTGTACGCGTTGTGTTCGGTGAAGGAGAACAAGGTGAGAGCGGTGAGGGCGGGGATTATGAGGGTGCTGGTGGAACTGATGGCGGACTTGGGGTCGAGCATGGTGGACAAGGCGGTGTACGTGGTGAGCGTGGTGGTGGGGGTTGCGGAGGGGAGGGCGTCGCTGGTGGAGGAAGGGGGGATTCCGGTGGTGGTGGAGATAGTGGAGGTTGGGACGCAGAGGCAGAAGGAGATTGCGGTTGGGGTTCTGTTGCAGATTTGCGAGGAGAGTGTGGTGTACCGTACTATGGTGTCCCGCGAAGGAGCCATTCCACCCTTGGTTGCTCTGTCACAGTCACACTCCAATCGCGCCAAGCAAAAGGCTGAGAAACTAATAGAGCTTCTTCGGCAACCAAGATCCGGCAATGGCGCTGCTCCTACCTTCCAAATGTCACCATAA | 1020 | 0.5882 | MLTTVNNDHSFSAFSDCNSDRSGEFPTPSSESRRLLIACAADNSDEFITHLVVNLHSCSIEEQKQATMEIRLLAKNKQENRVKIAKAGAIKPLISLLSSSSDLQLQEYVVTAILNLSLCDENKELINSSGAVKPLVGALETGTATAKENAACALLRLSQREEDKLAIGRAGAIPPLVRLLEGGGLRGKKDAATALYALCSVKENKVRAVRAGIMRVLVELMADLGSSMVDKAVYVVSVVVGVAEGRASLVEEGGIPVVVEIVEVGTQRQKEIAVGVLLQICEESVVYRTMVSREGAIPPLVALSQSHSNRAKQKAEKLIELLRQPRSGNGAAPTFQMSP | 339 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g00530 | 339 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 88 | 131 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | PANTHER | U BOX DOMAIN-CONTAINING | 47 | 323 | - | - | |
Spst9g00530 | 339 | Gene3D | - | 127 | 329 | IPR011989 | - | |
Spst9g00530 | 339 | Pfam | Armadillo/beta-catenin-like repeat | 78 | 117 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | Pfam | Armadillo/beta-catenin-like repeat | 120 | 158 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | Pfam | Armadillo/beta-catenin-like repeat | 162 | 199 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | SUPERFAMILY | ARM repeat | 45 | 320 | IPR016024 | - | |
Spst9g00530 | 339 | Gene3D | - | 43 | 126 | IPR011989 | - | |
Spst9g00530 | 339 | SMART | arm_5 | 201 | 241 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | SMART | arm_5 | 242 | 282 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | SMART | arm_5 | 77 | 118 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | SMART | arm_5 | 119 | 159 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | SMART | arm_5 | 160 | 200 | IPR000225 | GO:0005515 | |
Spst9g00530 | 339 | FunFam | RING-type E3 ubiquitin transferase | 37 | 328 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g00530 | Spst-Chr9 | 4663304 | 4664494 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g00530 | 28 | 329 | U-box Gene Family | AT2G23140 | 48.344 | 2.25e-81 | 258 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g00530 | - | - | gmx:100782449 | 463.766 |