Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00525 ATGGAAATAAAGCCCAGGAGTTACTTAGAACCATGCGATGAAATATGTGGAGTGCAACTTATTTATTGCTATGTGCTCCTTCTTCTTCGTCCCCTCTCTACGTTGAACACACGCTCCATCATCAAGAGCAAGGAAAGCATGAGCTGCAACGGTTGCCGAATTCTCCGGAAAAGATGCAGCGAGAGGTGCACCCTCAGATCTTCTCTCCACTGGATCCATTCTCCCCAGGCCCAAGCCCATGCAACTCTCTTTCTCGCTAAGTTCTTCGGCCGTAGCCACCTCGTCTATTCCATCTCCTCCGTTCCCCAACACAACAGACCCGCGCTGTTTCAGTCTCTACTCTTCGAGGCATGCGGCCGGACCATTAATCCCGTCAACGGCGCCGTCGGACTTCTGTTGACAGGTAACTGGCACGTGTGCGAGGCCGCCGTCGAGACTGTTCTAGCCGGAGGCGTTCTCCGGCCGTTGCCCGAGCTTGTGGCGCCGACGACCTTGGAAGAATCTTCTGAGAGCATGTTGTTGTCTGAGTTGCAGCCGATGGCGTCGATTGAAGAGTGTTTGAAGAGGAGGAGCGATGCGACAGCAGTGGCGGATTCCTCGTTGGTTTGGAGAGTATCGGAGATGGCGAGCTACGATGCTTGCAGCGGCAAAAATGAGAAAAAGCTTCTGAATCTGTTCGTGTAA 684 0.5322 MEIKPRSYLEPCDEICGVQLIYCYVLLLLRPLSTLNTRSIIKSKESMSCNGCRILRKRCSERCTLRSSLHWIHSPQAQAHATLFLAKFFGRSHLVYSISSVPQHNRPALFQSLLFEACGRTINPVNGAVGLLLTGNWHVCEAAVETVLAGGVLRPLPELVAPTTLEESSESMLLSELQPMASIEECLKRRSDATAVADSSLVWRVSEMASYDACSGKNEKKLLNLFV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00525 227 ProSiteProfiles LOB domain profile. 47 153 IPR004883 -
Spst9g00525 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 47 167 - -
Spst9g00525 227 Pfam Lateral organ boundaries (LOB) domain 48 147 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00525 Spst-Chr9 4622518 4623541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00525 47 160 AS2 family AT3G49940 71.053 5.12e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst9g00525 LOB 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00525 - - gmx:100800624 240.35