Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00517 ATGGCCGGTCCAAGGGTTTTCACGCAGTCTCAGGTTGCCCAACACAAATCCAACAAAGATTGTTGGCTCGTGATCAATGGCAGAGTGTTGGACGTGACAAAGTTTTTGGTGGAACACCCTGGTGGGGAAGAGGTGATTTTAGAAGTGGCTGGGAAGGAGGCCACAAATGAGTTTGATGCGATCGGACACAGCAAGACAGCACAAAAGCTGATACTAAAATACCAGGTTGGTGTCCTCCAAGGTGCCACGGTTCCAGACGTAGACATGAACGACGGTGTTGTGGACAAGGAATCCAACACCAAAGAGATGAGTGCCTTCGTGCTCAAAGATGGTGCAAACTCCAAGTCCATCGCATTTTACGAGTTCTTTGTTCCTCTCCTTGTTGCTGGTCTCTACTTCGGTTATCGATGTCTTACCATATAA 423 0.4799 MAGPRVFTQSQVAQHKSNKDCWLVINGRVLDVTKFLVEHPGGEEVILEVAGKEATNEFDAIGHSKTAQKLILKYQVGVLQGATVPDVDMNDGVVDKESNTKEMSAFVLKDGANSKSIAFYEFFVPLLVAGLYFGYRCLTI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00517 140 PANTHER CYTOCHROME B5 5 138 - -
Spst9g00517 140 SMART Cyt_b5_2 7 80 IPR001199 -
Spst9g00517 140 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Spst9g00517 140 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Spst9g00517 140 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Spst9g00517 140 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Spst9g00517 140 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Spst9g00517 140 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 84 IPR036400 -
Spst9g00517 140 Gene3D - 3 83 IPR036400 -
Spst9g00517 140 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Spst9g00517 140 FunFam Cytochrome b5 type B 2 84 - -
Spst9g00517 140 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00517 Spst-Chr9 4594761 4595332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00517 5 139 NADPH P450 reductases AT5G48810 46.667 9.77e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00517 - - gmx:100797990 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00517 9 4594761 4595332 Spst9g00517 9 4594761 4595332 ECH