Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00511 ATGAGTGCTCCGTCGCGAGAAGATGAGTCGAAGGAGGAGGAGAGAGACGAGGAAGCGAACCGGCTTCTAGAGGAAGCAGCAGCAGCATCATCATCGGAAGAAGATGTGGCATACGAAGCGGAGGAGAAGATCGTGGTGGCGGAATTCGAGTTTGACGCGGTGGACGATGCTAGCGTTCCTCCTTTCTCATGGAAGAAGCTGTGGCTCTTCACTGGGCCTGGGTTCTTGATGAGCATAGCGTTTTTGGATCCGGGGAATCTCGAGGGGGACCTCCAGGCTGGGGCCATCGCGGGCTACTCCCTCCTCTGGCTCTTGATGTGGGCCACCTTCATGGGCCTCTTGATCCAGCTTCTGTCAGCCAGGGTCGGGGTCGCCACCGGCCGCCACCTCGCCGAGCTCTGCAGGGACGAGTATCCCGATTGGGCCCGCCTCGTGCTCTGGTTCATGGCCGAGCTGGCCCTGATTGGCGCCGACATTCAAGAGGTCATTGGAAGTGCGATCGCCATCCAAATTCTTAGCCGAGGCTTCTTCCCTCTTTGGGCTGGAGTTCTAATCACTGCTTCCGATTGCTTTGTCTTTCTATTTCTTGAGAACTATGGAGTAAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTTCTGTTATGGGTCTTTCTTTTGCCTGGATGTTTGCTGATGCAAGACCTAATAGACAAGAGCTTTTAATAGGTATTTTGGTTCCGAAACTAAGCTCAAATACAATTCGTCAGGCTGTGGCTGTTGTGGGCTGTGTCATTATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTGCAATCAAGGAAGGTTGACCCTAAAAAGAAAGGTCGGGTACAGGAGGCTCTCAACTACTATTCAATTGAGTCATCAGCTGCACTTTCAGTCTCCTTCATTATCAATCTATTTGTCACAACAGTTTTCGCTAAGGGATTTTATGGATCAAAAAAGGCAAAAAGCATAGGACTGGTCAATGCAGGGCAGTATCTTGAAGAAAAGTATGGAGGAGGAGTCTTCCCTATTCTTTATATATGGGGAATTGGGTTATTGGCAGCTGGGCAGAGCAGCACCATCACTGGTACATATGCTGGGCAGTTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCTACCATAATTGTTGCTATAGTTTTTAATAGATCAGAAGCCTCCTTAGATATTTTGAATGAATGGCTCAATGTACTTCAGTCCATGCAAATTCCCTTTGCTCTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCAGGTCATGGGAACCTTTAGAGTTGGACCTGTTCTTGAGAGAGTAGCATGGACTATTGCTGGACTGATAATAGTAATTAATGGGTATCTCTTGTTAGATTTCTTCATTGCTGAGGTGAATGGTATCTTGCTTGGTCTTTTAGCCTGCTCCGGCACCACAGCCTATATTGCGTTCATTGTATATTTGGTTTCACAGAGTGGTATTCTTCCTTCTGCTTGGGTTAATCGTCTTCCCAAGGGATTTTCTTCATCTGGGAATTAA 1581 0.4763 MSAPSREDESKEEERDEEANRLLEEAAAASSSEEDVAYEAEEKIVVAEFEFDAVDDASVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPDWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFVFLFLENYGVRKLEAAFAVLISVMGLSFAWMFADARPNRQELLIGILVPKLSSNTIRQAVAVVGCVIMPHNVFLHSALVQSRKVDPKKKGRVQEALNYYSIESSAALSVSFIINLFVTTVFAKGFYGSKKAKSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNRSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRVGPVLERVAWTIAGLIIVINGYLLLDFFIAEVNGILLGLLACSGTTAYIAFIVYLVSQSGILPSAWVNRLPKGFSSSGN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 201 222 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 146 172 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 357 376 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 176 195 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 385 402 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 419 438 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PRINTS Natural resistance-associated macrophage protein signature 250 273 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 Hamap Divalent metal cation transporter MntH [mntH]. 54 475 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 30 504 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 65 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst9g00511 526 NCBIfam Nramp family divalent metal transporter 72 441 - -
Spst9g00511 526 MobiDBLite consensus disorder prediction 1 23 - -
Spst9g00511 526 MobiDBLite consensus disorder prediction 1 35 - -
Spst9g00511 526 Pfam Natural resistance-associated macrophage protein 88 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00511 Spst-Chr9 4547763 4551270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00511 1 506 Inorganic Solute Cotransporters AT1G47240 76.575 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00511 K21398 - gmx:100791117 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00511 9 4547763 4551270 Spst9g00511 9 4547763 4551270 ECH