Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00505 ATGTTGTTAGTTTCTGGTATGCAGAAAAAGAGGAGACCTGTGGTTGACTACATTGAGAAAGTTCAGAGAACAGTGACCCCTTACATGAGAGCAGATTTGGTCGACTGGTTAGTGGATTTGGCTGTGAGATACGATCTTCTCTCCGATACTCTTCATCTGTGTGTGTCATACATTGATAAGTATCTATCAGTTAAACCTGTGATCCAGTCAAATCTTATGTTGCTAGGTGTTTCGTCCATGTTCATTGCTTCGAAGTACGAGGAAATTGATCCACCCAGTTTGAAAGATTTTTGCGACATCACTGATAACATTTGTGATCAGACAGAGGTTGTAAAGATGGAAGCTAAAATACTCAAGTCCCTAAATTTTGAAATGGGCAACCCTACTGCCATCACTTTTCTGAGGGTTTTTCTTGGTTCTGTTTCTGAGAAGCAAAAAACTCCAAATTTGAAGATTGAATTTCTAGCTAGCTATTTTGCTGAGCTAAGTTTGTTGGATTATGATTGTATAAGATTCTTGCCCTCTATTGTGGCTGCATCTGCAATATTTCTTGCCAGATTTATCATCGAGCCTGAAGTGCATCCTTGGACTTCTTCGTTGTGTGAATGTTCGGGTTACAAACCAGTTGAGTTGAAAGAGTGTGTCCTCATCTTGCATAACTTGTATTTGTCAAGAAAGGCAGAGTCATTCCAAGCTGTTAAGAAGAAATACAAGCAGCACAAGTTCAAATTCGTGGCAAATCTGCCTTCCCCTCCACACGTACCAAGTTACTACTTTGAAGATCACTCACATATTGATGAGGGAAAACTTAACCCGAAGCCTGATGAGATCAGCAAACCTTCTGCACAATCTACAATGATTCCATGA 867 0.4002 MLLVSGMQKKRRPVVDYIEKVQRTVTPYMRADLVDWLVDLAVRYDLLSDTLHLCVSYIDKYLSVKPVIQSNLMLLGVSSMFIASKYEEIDPPSLKDFCDITDNICDQTEVVKMEAKILKSLNFEMGNPTAITFLRVFLGSVSEKQKTPNLKIEFLASYFAELSLLDYDCIRFLPSIVAASAIFLARFIIEPEVHPWTSSLCECSGYKPVELKECVLILHNLYLSRKAESFQAVKKKYKQHKFKFVANLPSPPHVPSYYFEDHSHIDEGKLNPKPDEISKPSAQSTMIP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00505 288 SMART cyclin_7 136 220 IPR013763 -
Spst9g00505 288 SMART cyclin_7 35 119 IPR013763 -
Spst9g00505 288 FunFam G2/mitotic-specific cyclin 13 124 - -
Spst9g00505 288 ProSitePatterns Cyclins signature. 30 61 IPR006671 -
Spst9g00505 288 Gene3D - 15 119 - -
Spst9g00505 288 Pfam Cyclin, C-terminal domain 128 250 IPR004367 -
Spst9g00505 288 PIRSF Cyclin_A_B_D_E 5 258 IPR046965 GO:0016538|GO:0044772
Spst9g00505 288 MobiDBLite consensus disorder prediction 269 288 - -
Spst9g00505 288 Pfam Cyclin, N-terminal domain 8 125 IPR006671 -
Spst9g00505 288 Gene3D - 120 255 - -
Spst9g00505 288 FunFam Cyclin superfamily protein, putative 125 197 - -
Spst9g00505 288 SUPERFAMILY Cyclin-like 128 253 IPR036915 -
Spst9g00505 288 SMART Cyclin_C_2 128 251 IPR004367 -
Spst9g00505 288 PANTHER CYCLINS 11 243 IPR039361 -
Spst9g00505 288 SUPERFAMILY Cyclin-like 7 125 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00505 Spst-Chr9 4513018 4514577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00505 7 261 Core Cell Cycle Gene Families AT5G43080 57.647 1.65e-101 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00505 K06627 - gmx:100786875 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00505 9 4513018 4514577 Spst9g00505 9 4513018 4514577 ECH