Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00503 ATGGAGACTCGTGCTGCCTCCAAGAGAAAGGCAAACGCCCTAGTTGTGGTCGAAAAACTACACCCAAAAAGACATAGGGTTGCGTTGGCTGAGCTCCCCAATTTACCGAATCTTGTTGTCCCTGGAACTCAAAATCCACCCAAAGAGAAATTGCATTGTGGGAAGAATTCCAATGCGAAGCTATCTGCCTCAAGCAACCTCCTTTCTTCCCCCCACATTGATGAATCTTACGTCTCCGATCTCTATGAGTATCTTCGTGAAATGGAGATGCAGAAAAAGAGGAGACCAATAGTTGACTACATTGAAAAAGTTCAGAAGGTAGTTACACCAACCATGAGAGCAATATTGGTGGATTGGTTAGTAGAAGTAGCTGAGGAGTACAAGCTTCTCCCGGACACTCTTCATCTCTCTGTTTCATACATTGATAGATTTCTGTCTGTTAATCCTGTGAGTAAATTGAGACTTCAGTTGCTGGGTGTTTCCTCCATGCTCATTGCTTCCAAATATGAGGAAATGGATCCACCTGGTGTGGACGAGTTTTGTAGCATAACTGATAACACGTATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGACATACTCAAGTCCCTAAAGTTTGAAATGGGAAATCCTACTGTAAACACCTTTCTTGGGAGGTTTGCTGATGTGGCTTCGGATAACCGAAAGACGCCAAATTCACAGATTGAATTTCTGGGCTGCTATCTTGCTGAGCTAAGCTTGCTGGACTATGATTGTTTGAGGTTTTTGCCTTCTATTGTGGCAGCGTCAGTTGTATTTCTTGCCAGATTTATTATCTCGCCTGAAGTGCATCCATGGACTTCTTCTTTGTGTGAATGTTCGGGTTACAAACCAGCTGAATTGAAAGAATGTGTCCTTATCTTGCATGACCTGTATTTGTTAAGAAAGGCAGCATTCTTCAAAGTTGTTCGGGATAAGTACAAGCAGCCAAAGAACATCCCAAATATGTTTTATCGAGAAGGGGTGATTCGGACTATATGTACTAAACAAGTGTTTACCTTCGAATCAATGATGAAACACCATAGGAGGCTTGAAAGTGGAGTGGAAAGCTGA 1092 0.4258 METRAASKRKANALVVVEKLHPKRHRVALAELPNLPNLVVPGTQNPPKEKLHCGKNSNAKLSASSNLLSSPHIDESYVSDLYEYLREMEMQKKRRPIVDYIEKVQKVVTPTMRAILVDWLVEVAEEYKLLPDTLHLSVSYIDRFLSVNPVSKLRLQLLGVSSMLIASKYEEMDPPGVDEFCSITDNTYDKAEVVKMEADILKSLKFEMGNPTVNTFLGRFADVASDNRKTPNSQIEFLGCYLAELSLLDYDCLRFLPSIVAASVVFLARFIISPEVHPWTSSLCECSGYKPAELKECVLILHDLYLLRKAAFFKVVRDKYKQPKNIPNMFYREGVIRTICTKQVFTFESMMKHHRRLESGVES 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00503 363 SUPERFAMILY Cyclin-like 71 208 IPR036915 -
Spst9g00503 363 FunFam Cyclin superfamily protein, putative 208 280 - -
Spst9g00503 363 ProSitePatterns Cyclins signature. 113 144 IPR006671 -
Spst9g00503 363 Pfam Cyclin, C-terminal domain 211 324 IPR004367 -
Spst9g00503 363 FunFam G2/mitotic-specific cyclin 96 207 - -
Spst9g00503 363 CDD CYCLIN_AtCycA-like_rpt2 211 324 - -
Spst9g00503 363 Gene3D - 94 209 - -
Spst9g00503 363 Gene3D - 80 324 - -
Spst9g00503 363 PANTHER CYCLINS 60 322 IPR039361 -
Spst9g00503 363 SMART cyclin_7 215 303 IPR013763 -
Spst9g00503 363 SMART cyclin_7 118 202 IPR013763 -
Spst9g00503 363 Pfam Cyclin, N-terminal domain 80 208 IPR006671 -
Spst9g00503 363 SMART Cyclin_C_2 211 329 IPR004367 -
Spst9g00503 363 SUPERFAMILY Cyclin-like 211 324 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00503 Spst-Chr9 4502500 4506940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00503 3 324 Core Cell Cycle Gene Families AT5G43080 56.037 4.89e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00503 K06627 - gmx:547779 511.146