LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst9g00503	ATGGAGACTCGTGCTGCCTCCAAGAGAAAGGCAAACGCCCTAGTTGTGGTCGAAAAACTACACCCAAAAAGACATAGGGTTGCGTTGGCTGAGCTCCCCAATTTACCGAATCTTGTTGTCCCTGGAACTCAAAATCCACCCAAAGAGAAATTGCATTGTGGGAAGAATTCCAATGCGAAGCTATCTGCCTCAAGCAACCTCCTTTCTTCCCCCCACATTGATGAATCTTACGTCTCCGATCTCTATGAGTATCTTCGTGAAATGGAGATGCAGAAAAAGAGGAGACCAATAGTTGACTACATTGAAAAAGTTCAGAAGGTAGTTACACCAACCATGAGAGCAATATTGGTGGATTGGTTAGTAGAAGTAGCTGAGGAGTACAAGCTTCTCCCGGACACTCTTCATCTCTCTGTTTCATACATTGATAGATTTCTGTCTGTTAATCCTGTGAGTAAATTGAGACTTCAGTTGCTGGGTGTTTCCTCCATGCTCATTGCTTCCAAATATGAGGAAATGGATCCACCTGGTGTGGACGAGTTTTGTAGCATAACTGATAACACGTATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGACATACTCAAGTCCCTAAAGTTTGAAATGGGAAATCCTACTGTAAACACCTTTCTTGGGAGGTTTGCTGATGTGGCTTCGGATAACCGAAAGACGCCAAATTCACAGATTGAATTTCTGGGCTGCTATCTTGCTGAGCTAAGCTTGCTGGACTATGATTGTTTGAGGTTTTTGCCTTCTATTGTGGCAGCGTCAGTTGTATTTCTTGCCAGATTTATTATCTCGCCTGAAGTGCATCCATGGACTTCTTCTTTGTGTGAATGTTCGGGTTACAAACCAGCTGAATTGAAAGAATGTGTCCTTATCTTGCATGACCTGTATTTGTTAAGAAAGGCAGCATTCTTCAAAGTTGTTCGGGATAAGTACAAGCAGCCAAAGAACATCCCAAATATGTTTTATCGAGAAGGGGTGATTCGGACTATATGTACTAAACAAGTGTTTACCTTCGAATCAATGATGAAACACCATAGGAGGCTTGAAAGTGGAGTGGAAAGCTGA	1092	0.4258	METRAASKRKANALVVVEKLHPKRHRVALAELPNLPNLVVPGTQNPPKEKLHCGKNSNAKLSASSNLLSSPHIDESYVSDLYEYLREMEMQKKRRPIVDYIEKVQKVVTPTMRAILVDWLVEVAEEYKLLPDTLHLSVSYIDRFLSVNPVSKLRLQLLGVSSMLIASKYEEMDPPGVDEFCSITDNTYDKAEVVKMEADILKSLKFEMGNPTVNTFLGRFADVASDNRKTPNSQIEFLGCYLAELSLLDYDCLRFLPSIVAASVVFLARFIISPEVHPWTSSLCECSGYKPAELKECVLILHDLYLLRKAAFFKVVRDKYKQPKNIPNMFYREGVIRTICTKQVFTFESMMKHHRRLESGVES	363

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst9g00503	363	SUPERFAMILY	Cyclin-like	71	208	IPR036915	-
	Spst9g00503	363	FunFam	Cyclin superfamily protein, putative	208	280	-	-
	Spst9g00503	363	ProSitePatterns	Cyclins signature.	113	144	IPR006671	-
	Spst9g00503	363	Pfam	Cyclin, C-terminal domain	211	324	IPR004367	-
	Spst9g00503	363	FunFam	G2/mitotic-specific cyclin	96	207	-	-
	Spst9g00503	363	CDD	CYCLIN_AtCycA-like_rpt2	211	324	-	-
	Spst9g00503	363	Gene3D	-	94	209	-	-
	Spst9g00503	363	Gene3D	-	80	324	-	-
	Spst9g00503	363	PANTHER	CYCLINS	60	322	IPR039361	-
	Spst9g00503	363	SMART	cyclin_7	215	303	IPR013763	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst9g00503	Spst-Chr9	4502500	4506940	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst9g00503	3	324	Core Cell Cycle Gene Families	AT5G43080	56.037	4.89e-120	349

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst9g00503	K06627		-	gmx:547779	511.146

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