Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00490 ATGGAAAGTGGATTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTCAGAACCATTTGCACTTCTTCCAATTCTTCCATTTCTTCTAAGTGGGTTTATGCTGTCTTCTGGAGGATATTGCCTCGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGAACTGCGCTTGATCTCTCCAAAGGAAATAAAAGGAACTGGATTCTTGTCTGGGAAGATGGGTTCTGCGATTTTAACGAATGCGAGCAGAGGAAGAGTGGTAGTGGTTACTTGAACGGTAGATTTGGAGCTGACGTATTCTTCAAAATGTCGCATGAGGTTTACAATTATGGAGAGGGACTAGTGGGAAAGGTTGCCGCAGATAATAGTCACAAATGGGTTTACAATGAGAGTCACAACAACGAGTTTGAAGCTAGCTATACTGCTTCATGGAATGCTTCTGTCGAGCCTCAACCAAAGGCATGGGAGTTTCAGTTCAATTCAGGCATTCAGAGCATAGTCATAATAGCTGTCAGAGAAGGCGTAGTGCAATTGGGTTCTTTTAATAAGACTGCAGAGGACCTGAATCTGGTGATCAGCATACAAAGACAATTCAGCTACCTTCAAAGCATACCGGGTGTATTTGGTATTCAAAGACCGTACCTACCCATTCAATATCCATACATTGTGAAGCCCAATTTCATGGAAAGCAATGGAATGCCTCTATATGATATGACCTGGAACACCCCTCAGAATGGAGCACCAGGCCCATCTCTTTGTTCAGGTTCTCCGCCTTTACCATTACCAGCCATGCCTTGCAGTTTTGGAGCTTTGCTATCAAAGTTACCATCCGGAGTCCCACCCCATAATCAAGCCCCTAATTCTGGGACACAAAGCAGCACTATTGAGAGAGTGAAGATTGAAGACTGCGAATTTCATCCTACCCATGATGGTGGTGATCACAAAGGAAAGGTTGTTCCTTGA 960 0.4406 MESGLPLLNCLLQQTLRTICTSSNSSISSKWVYAVFWRILPRNFPPPRWEFGGTALDLSKGNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGADVFFKMSHEVYNYGEGLVGKVAADNSHKWVYNESHNNEFEASYTASWNASVEPQPKAWEFQFNSGIQSIVIIAVREGVVQLGSFNKTAEDLNLVISIQRQFSYLQSIPGVFGIQRPYLPIQYPYIVKPNFMESNGMPLYDMTWNTPQNGAPGPSLCSGSPPLPLPAMPCSFGALLSKLPSGVPPHNQAPNSGTQSSTIERVKIEDCEFHPTHDGGDHKGKVVP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00490 319 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 197 IPR025610 -
Spst9g00490 319 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00490 Spst-Chr9 4391268 4392958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00490 13 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.579 1.99e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00490 - - gmx:100817704 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00490 9 4391268 4392958 Spst9g00490 9 4391268 4392958 ECH