Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00487 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCGGTTCATGTTCGACCACTCATCGCCGATGAGAAGCTTCAAGGATGCAAAGACTGCGTCACCGTCGTTTCTGGGAAGCCGCAGTTCCGCATTCTAGCTACTATTTTCCTCTTCTGCCAGAGATCTGGATCCGAAACTGCTTACGTACAAATTGGTCCCCACTCCTTTACATTTGATCATGTTTATGGAAGCACTGGTTCCCCCTCAAGTGCCATGTTCGAAGAATGTGCTGCTCCCCTTGTTGATGGTTTGTTTCAAGGATATAATGGTACTGTTCTGGCATATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGTCAAACGGGAATAATACCTCAAGTTATGAATGTTTTGTTTAGCAAAATTGAGACCCTAAAGCACCAAATTGATTTTCAGTTGCATGTGTCTTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCCATGAGCAAACCAGAAACTGCAAATGGACATTCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAACGGTGTTATCACCCTTGCAGGATCTACTGAACTCAGTGTAACAACACTAAAAGAAATGGCTGCTTGCCTGGAACAGGGATCATTGAGCAGGGCAACTGGGAGCACAAATATGAACAACCAATCTAGTCGATCTCATGCCATCTTCACCATCACACTGGAACAAATGCGAAAGCTGAATGTTCCTGGTGATAGCGGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACCTAGTTGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGAAATGTTATTAGTGCTCTTGGTGATGAAAAGAAGCGAAAGGAAGGCGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTGTCATGATTGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCCAATCGTGCACGCAATATCCAAAATAAACCTGTTATCAATAGAGATCCCATGTCCAATGAGATGTTAAAAATGCGACAACAACTAGAGTATTTGCAGGCAGAACTTTGTGCTCGAGCTGGTGGTTCTTCTGAAGAAGTTCAGGTCCTTAAGGAAAGGATAGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTATTGTAGAACCAGGTGAAAGGGAAGCTTATGATGGTAACACATACATTGTGAAGACTGATGCAATTAAGAGGAGCTTACCTATCATAGAAGCTGAGTATCCAATGAGTGAAACAGTGGCAGGTGATTCAAGGGAAATTGAAGAAGTAACAAAAGAGTGGGAGCACACACTTCTGCAGAATAGTATGGATAGAGAGTTGCATGAATTGAATAAACGTTTGCAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAACATTTTGGAAGAAAGATAATGGAATTGGAAGATGAGAAGAGAGTAGTGCAGCGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATTCATGCCCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTGAAGAAAAAGCAAGAGAGTCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTGTATAAAGGCCCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAAGCAGAACAGTTTCGGCAGTGGAAGGCTTCAAGAGAGAAAGAGTTGTTGCAAGTACTTCAGAGAAAAACTGAAGAAGCTGCTATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCACGTAAAACTTCCAGCCGAGAGACTTCAGTTACAATGAATGGAAGTGGAACAAATGGTCAGAGCAATGAGAAGTCTTTACAACGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAAGAGCATGAAGTCCGTTTTGAGTACGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAATTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCTCAGTCCACCAAGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCTAGAATAGCTTCACTTGAGAACATGCTGAGTATATCATCTAATTCGCTTGTCGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGGGCCTTCTCTAATCGTGGACGCTGGAATCAATTGCGCTCAATGGGAGAAGCCAAGAATTTACTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATAAAAGAACTTGTTGGTCTCTTACGGCAAAGTGAGATGAAGAGAAAAGAAGTTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTATTGGAAGCACATTGGCTGCACCACCTTCGGGGGACTCCCCAAATCCATTGAAACAACATCCTGAAGACATGAAGGGGCCCTTATCTCCAGTGTCTATGCCAGTGCCTAAACAGCTAAAATACACGCCAGGGATTGCCAATGGTTTGGTAAGGGAATCAGCAGCATTTGTAGACCAGGGTAGAAGGATGATACCCATGGGACAGCTGTCAATGAAAAAACTAGCAATGGTAGGACAAGCTTCTGGAAAGTTATGGAGATGGAAAAGAAGTCATCATCAGTGGCTGCTACAATTCAAGTGGAAATGGCAAAAACCATGGAGACTTTCAGAATGGATACGACATAGTGATGAGACGATCATGAAAACAAAACCACGCTCACAAGTTTTGCCACGTATCAGGTGA 3075 0.4293 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQFRILATIFLFCQRSGSETAYVQIGPHSFTFDHVYGSTGSPSSAMFEECAAPLVDGLFQGYNGTVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKHQIDFQLHVSFIEILKEEVRDLLDPSSMSKPETANGHSGKMTSPGKPPIQIRETSNGVITLAGSTELSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNVPGDSGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSIVEPGEREAYDGNTYIVKTDAIKRSLPIIEAEYPMSETVAGDSREIEEVTKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKIMELEDEKRVVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQVLQRKTEEAAMATKRLKELLEARKTSSRETSVTMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKVREQAIGSTLAAPPSGDSPNPLKQHPEDMKGPLSPVSMPVPKQLKYTPGIANGLVRESAAFVDQGRRMIPMGQLSMKKLAMVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMKTKPRSQVLPRIR 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00487 1024 Coils Coil 668 688 - -
Spst9g00487 1024 Coils Coil 511 531 - -
Spst9g00487 1024 SMART kinesin_4 6 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 Coils Coil 423 443 - -
Spst9g00487 1024 MobiDBLite consensus disorder prediction 170 196 - -
Spst9g00487 1024 Coils Coil 544 578 - -
Spst9g00487 1024 ProSiteProfiles Kinesin motor domain profile. 8 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 FunFam kinesin-like protein KIN-4A isoform X1 2 411 - -
Spst9g00487 1024 Pfam Kinesin motor domain 15 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 413 IPR027417 -
Spst9g00487 1024 MobiDBLite consensus disorder prediction 892 918 - -
Spst9g00487 1024 ProSitePatterns Kinesin motor domain signature. 278 289 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst9g00487 1024 Gene3D Kinesin motor domain 2 411 IPR036961 -
Spst9g00487 1024 Coils Coil 857 891 - -
Spst9g00487 1024 MobiDBLite consensus disorder prediction 689 711 - -
Spst9g00487 1024 CDD KISc_KIF4 7 384 - -
Spst9g00487 1024 MobiDBLite consensus disorder prediction 692 711 - -
Spst9g00487 1024 Coils Coil 587 659 - -
Spst9g00487 1024 PRINTS Kinesin heavy chain signature 236 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 PRINTS Kinesin heavy chain signature 279 297 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 PRINTS Kinesin heavy chain signature 333 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst9g00487 1024 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1016 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00487 Spst-Chr9 4351551 4366964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00487 69 407 Calmodulin-binding Proteins AT5G65930 35.103 1.50e-52 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00487 - - gmx:100802585 1851.64