Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00478 ATGATTACCCCTGTTGTTCGGCGCATTTCAGAATGTTTCGTTAAACCAAATGGTTTAAACCATGTGTCAAACCAAATCTGTTATTTAACACCTTGGGATATTGCTAAGTTATCCACGCACTATATCCAAAAGGGTCTACTGTTCCAAAAACCTGCAACACTTGTTGATCAGCATGATTTCATAGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCCCTCACCCTCTTTCATTTCTATCCATTGTCTGGTCGTCTTGTCACCACCAAAACCCAAAACCCTCCGTCCTACGCTGTTTTTATTGATTGTAACAACAGTGATGGAGCTAGATTCATCTATGCAACTTTGGATTTGACCATATCTGACATCCTCTCCCCCATTGACGTCCCACCCATTTTTCAATCCTTCTTTGACCACAACCACGATGGTCACACCATGCCGTTGTTGTCCATCCAAGTCACTGAATTAGTTGATGGTGTTTTCATAGGTTGTTCCATGAATCACGCTGTCGGCGATGGCACTTCGTATTGGAATTTCTTCAATACATGGTCTCAGATCTTCCAAGCTGAACCCCAGGCCGATGAATATGGTGTTCCCGTCCTACGCCAACCTATTCACAACCGCTGGTTTCCAAACGATTGCAATCCACCAATCAATCTTCCTTTCAAACATCATGACGAGTTTATCAGCAGATTTGAAGCACCCTTCTTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCTATTGGAAAACTGAAAGCAAAGGCAAACTCGGAGTCCAACAGTAATACCACGAAAATCTCTTCATTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCATGCTCCCTACCATATGAGCGAAGAACAAGTTGCAGGTTAGCTGCAAACAATCGATCAAGAATGGAACCGCCTCTACCTCATGAATACTTTGGAAACTCAGTTCATCAGGTGAGTGCCGAAACGACAGTAGGGGAATTACTGGAGAATGATCTCGGATGGGCAGCGTGGAAGTTGCACCTGGCTGTTACATGGCACAATGACAGAGAGGTGTTGCAATCACTCCAAGAGTGGTTGCAGTCTCCAGTCATCAACCAACTTGGTCAGCCCATGGACCCGTACGTTGTGCTCATAAGTAGCTCACCCAGGTTCAACATGTATGGGAATGAGTTTGGAATGGAGAAAGCAGTGGCTGTTAGAAGTGGTTATGCCAACAAATTTGATGGGAAGGTGACATCATATCCAGGTCGTGAAGGAGGGGGAAGCATCGATTTGGAAGTTTGCCTTTTACCACATATAATGAGCGCACTGGAATCAGACACGGAGTTTATGAATGCAGTTTCGGTTTTCAATTCCTTACAATAG 1374 0.4418 MITPVVRRISECFVKPNGLNHVSNQICYLTPWDIAKLSTHYIQKGLLFQKPATLVDQHDFIENLLEKLKHSLSLTLFHFYPLSGRLVTTKTQNPPSYAVFIDCNNSDGARFIYATLDLTISDILSPIDVPPIFQSFFDHNHDGHTMPLLSIQVTELVDGVFIGCSMNHAVGDGTSYWNFFNTWSQIFQAEPQADEYGVPVLRQPIHNRWFPNDCNPPINLPFKHHDEFISRFEAPFLRERIFHFSAESIGKLKAKANSESNSNTTKISSFQSLSALVWRSITRACSLPYERRTSCRLAANNRSRMEPPLPHEYFGNSVHQVSAETTVGELLENDLGWAAWKLHLAVTWHNDREVLQSLQEWLQSPVINQLGQPMDPYVVLISSSPRFNMYGNEFGMEKAVAVRSGYANKFDGKVTSYPGREGGGSIDLEVCLLPHIMSALESDTEFMNAVSVFNSLQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00478 457 Pfam Transferase family 20 447 - -
Spst9g00478 457 Gene3D - 230 443 IPR023213 -
Spst9g00478 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 448 - -
Spst9g00478 457 Gene3D - 8 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00478 Spst-Chr9 4303012 4304385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00478 66 441 Monolignol Biosynthesis Gene Families AT5G48930 27.273 3.70e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00478 - - gmx:100795679 781.941