Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00477 ATGGTTACCCCTGTCGTTCAGCGCATTTCAGAATGCTTCGTCAAACCACCTTATTTAAACCAAGTGTCAAACCAAATATGCAATTTAACACCTTGGGATATTACCATGTTATCTATGCACTATATCCAGAAGGGTCTAGTCTTCAAGAAGCCTGTAACCCTTGTTGATCAACATCATTTCATGCAAAATTTGTTGGAAAAGCTCAAACACTCACTTTCTCTCACCCTCTCCCATTTCTATCCATTAGCTGGCCACCTTGTCACCCACAAAACCCAAAACCCTCCTTCATATGCTATTTTCGTTGATTGCAACAACAGTGATGGAGCTAGATTCATTTATGCAACTCTGGATATGACCATAGCTGATATCCTCTCCCCAGTTGACGTCCCACCCATTGTTCACTCATTCTTTGACCACCACAGAGCAGTCAACTATGATGGTCACACCATGCCGTTGTTGTCCATCCAAGTCACTGAACTAGTTGATGGTGTTTTCATCGGTTGTTCCATGAATCACGCTGTCGGTGACGGCACTTCGTATTGGAATTTCTTCAATACATGGTCTCAGATCTTCCATGCTCAACCCCAAGCCAATGAATATGAGGTTCCCGTTCTACACCAACCTGTCCACAACCGCTGGTTTCCAAACGACTGCAGTCCACCAATCAATCTTCCTTTCAAACATCATCACGAGTTTATCAGCAGATTTGAAGCGCCCTTGCTGAGAGAGAGATTCTTTCACTTTTCAGCAGACTCTATAGCAAAACTAAAAGCAAGGGCAAACTCAGAGGCCAACAGTGATACCTCAAAAGTCTCTTCATTCCAGTCATTATCAGCACTTGTGTGGAGATCCATAACTCGTGCATGCTCTTTACCACATGGACAAAAAACAATTTGCAGGTTAGCTGCAAACAATCGATCAAGAATGGAACCGCCTCTGTCTCATGAGTACTTTGGAAACTCAATTCAAAAGCTGAGTGCAGAAACAACAGTAGGTGAATTACTTGAAAATGATCTAGGATGGGCTGCATGGAAGTTGCACCTGTCTGTTAAAAGGCACAATGACAAAGTGGTGTTGCAATCACTCAAAGAGTGGTTACAATCTCCGCTCATCTACCAACTTGGTCAGCCCATGAACCAGTACGTTGTGATGATAAGTAGCTCACCCAGGTTCAATATGTACGAGAATGAGTTTGGAATGGAAAAAGCAGTGGCAATTAGAAGTGGCTATGCCAACAAATTTGATGGGAAGGTGATATCATATCCAGGTCGTGAAGGAGGGGGCAGCATTGAGTTGGAAGTGTGCCTTTTACCACATATAATGTGCGCTCTGGAATCAGACGGGGAGTTTATGGATGCAGTTTCGGTTTCCAATCCCTTGTACTAG 1386 0.4351 MVTPVVQRISECFVKPPYLNQVSNQICNLTPWDITMLSMHYIQKGLVFKKPVTLVDQHHFMQNLLEKLKHSLSLTLSHFYPLAGHLVTHKTQNPPSYAIFVDCNNSDGARFIYATLDMTIADILSPVDVPPIVHSFFDHHRAVNYDGHTMPLLSIQVTELVDGVFIGCSMNHAVGDGTSYWNFFNTWSQIFHAQPQANEYEVPVLHQPVHNRWFPNDCSPPINLPFKHHHEFISRFEAPLLRERFFHFSADSIAKLKARANSEANSDTSKVSSFQSLSALVWRSITRACSLPHGQKTICRLAANNRSRMEPPLSHEYFGNSIQKLSAETTVGELLENDLGWAAWKLHLSVKRHNDKVVLQSLKEWLQSPLIYQLGQPMNQYVVMISSSPRFNMYENEFGMEKAVAIRSGYANKFDGKVISYPGREGGGSIELEVCLLPHIMCALESDGEFMDAVSVSNPLY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00477 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 451 - -
Spst9g00477 461 Gene3D - 8 223 IPR023213 -
Spst9g00477 461 Pfam Transferase family 21 451 - -
Spst9g00477 461 Gene3D - 232 446 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00477 Spst-Chr9 4295506 4296891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00477 68 436 Monolignol Biosynthesis Gene Families AT5G48930 26.835 9.01e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00477 - - gmx:100795679 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00477 9 4295506 4296891 Spst9g00477 9 4295506 4296891 ECH