Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00473 ATGACTACCCCTGTCGTTCGACTCGTTTCAGAAATTTTCGTCAACTCTCACCCCTCCAACGAAGTCTCCAACCAAATCTACAATCTAACTCCTTGGGATATTGTTATGCTTTCTTCCCACTATATACAGAAGGGTTTGCTCTTCAGCAAGCCTGCAACTATTCTAGATCAACAACATTTCATGGAGAATCTGTTGGAGAAGCTCAAGCACTCCCTTTCTCTCACCCTCTCCCATTTCTATCCATTGTCCGGTCGCCTTGTCACCCATAAAACCCAACTCCCTCCCTCTTATACTATTTTTGTTGATTGCAACAACAGTGATGGAGCTAGATTCATCTATGCAACCTTGGATATGACCATATATGATATTCTCTCTCCCGTTGATGTCCCTCCCATTTTTCAATCATTGTTTGACCACGATAGAGCACTCAACCAAGATGGTCACAGCATGCCGCTGTTGTCCATCCAAGTCACTGAATTGGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACTCTATTGGTGATGGAACTTCTTATTGGAATTTCTTTAACACATGGTCTCAGATCTTTCAAGCTGAAAGCCATGAATATGATGTTCCCATCTCACACCAACCCATTCACAATCGTTGGTTTCCAAATAATTGTAGTCCGCCAATCTCTCTTCCTTTCAAACATCACGACGAGTTTATCGAAAGATTTGAAGCACCCTTGCTGAGAGAGAGAGTTTTCCACTTTTCAGCAGAGTCTATTGCGAAACTTAAAAGAAAGGCCAACCTAGAGTCTAATACCACCAGCATCTCATCACTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCTCTCCCCACAGTCTGACCAAAAAACAAGTTGCAGATTAGTCGCAAACAATCGATCAAGAATGGAGCCGTCTCTGCCTACTGAATACTTTGGCAACTGCCTTCATGCAGTGAGTGGAGAAACGACAGCAGGGGAATTGCTTGAGAATGGCATAGGATGGGCAGCATGGAAGTTGCACGTGGCTGTTGCAAACCTTAACTTTACAGTAGTGATGCAATTCCTCCAAAGGTGGTTAGATTCTCCTTTCATAATTCAGACCGATCGTTTCTTTGACCCCTATAGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTATGGAAATGAATTTGGAATGGGAAAAGCGGTGGCGGTTAGAAGTGGGTATGCAAACAAATTTGATGGGAAAGTGACTTCATATCCAGGGCATCAAGGAGGGGGAAGCATCGATTTGGAAGTTTGCCTCTTGCCACATATAATGAGTGCTCTCGAATCAGACAAAGAGTTTATGGATGCAGTTTCTGTCTAA 1359 0.4349 MTTPVVRLVSEIFVNSHPSNEVSNQIYNLTPWDIVMLSSHYIQKGLLFSKPATILDQQHFMENLLEKLKHSLSLTLSHFYPLSGRLVTHKTQLPPSYTIFVDCNNSDGARFIYATLDMTIYDILSPVDVPPIFQSLFDHDRALNQDGHSMPLLSIQVTELVDGVFIGCSMNHSIGDGTSYWNFFNTWSQIFQAESHEYDVPISHQPIHNRWFPNNCSPPISLPFKHHDEFIERFEAPLLRERVFHFSAESIAKLKRKANLESNTTSISSLQSLSALVWRSITRALSPQSDQKTSCRLVANNRSRMEPSLPTEYFGNCLHAVSGETTAGELLENGIGWAAWKLHVAVANLNFTVVMQFLQRWLDSPFIIQTDRFFDPYSVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHQGGGSIDLEVCLLPHIMSALESDKEFMDAVSV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00473 452 Gene3D - 230 442 IPR023213 -
Spst9g00473 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 447 - -
Spst9g00473 452 Gene3D - 6 220 IPR023213 -
Spst9g00473 452 Pfam Transferase family 18 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00473 Spst-Chr9 4237289 4238647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00473 66 441 Monolignol Biosynthesis Gene Families AT5G48930 26.768 6.33e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00473 - - vra:106761257 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00473 9 4237289 4238647 Spst9g00473 9 4237289 4238647 ECH