Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00472 ATGAGTAGCCCTGCCGTCCGTTGCATTTCAGAATGTCTCGTGAAGCCACACCACTCCAACCAAGTCTCAAACCAAATCTGGGATTTAACACCTTGGGATATTGCTATGCTCTCTGTGCACCACATCCAGAAGGGTTTACTCTTCATCAAACCTTCCACGCTTCATCCACATCATTTCATGGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTCCCGTTTCTATCCATTGTCTGGTCGCCTTGTCACCCACAAAACCCAACACCCTCCCTCTTATATTGTTTTTGTTGATTGCAACAACACTGATGGAGCTAGATTCATCTATGCAACTTTAGACATGACCATATCTGACATACTCTCCCCTGTTGACGTCCCACCCACTATTCACTCATTCTTTGACCACCACAAAGCCATCAACCATGATGGTCACACCATGCCGCTGTTGTCCATCCAGGTGACTGAATTGGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCATGTTATTGGCGATGGAACTTCGTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAAGCACAATCTCATCAAGCTCAAGCTCATGAATATGACGTTCCCATTTCATACCAACCCATTCATAATCGCTGGTTTCCAAACAATTGTAGTCCGCCAATCAATCTTCCTTTCAAACATCATGACGAGTTTATTAGCAGATCTGAAGCATCATTGTTGAGAGAGAGAATTTTTCAATTTTCAGCAGAGTCTATTGCCAAACTGAAAGCAAAGGCCAACTCGGAATCCAATACCACGGAAATATCTTCGTTCCAATCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCGCTCCCCACCTAACGAGCAAAAAACAAGTTGCAGGTTGGCGGCAAATTGTCGGTCAAGAATGGAACCAACTCTGCCTGAAGAATACTTTGGAAACTGCCTTCATGCAGTAGAGGCAGAAACGACAACAGGGGAATTGCTTGAGAATGGCATAGGATGGGCAGCATGGAAGTTGCACGTGGCTGTTGCAAACCTTAACGATAGAGTGGTGTTGCAATTTCTCCAACAGTGGTTAGAGTCACCTTTGATATATCAAATTGGTCGTTTCTTTGACCCGTATTGTGTGATGATGGGTAGCTCGCCCAGGTTCAATATGTATGGGAATGATTTTGGAATGGGAAAAGCAGTGGCAGCTAGAAGTGGGTATGCTAACAAGTTTGATGGGAAAGTGTCATCCTACCCAGGACGTGATGGAGGGGGAAGCATTGATTTAGAAGTGTGCCTTTTGCCACATATAATGAGCTCTCTGGAATCAGATGAGGAGTTCATGAATGCTCTTTTGCCATCCAATACATTGTTCTAG 1386 0.4416 MSSPAVRCISECLVKPHHSNQVSNQIWDLTPWDIAMLSVHHIQKGLLFIKPSTLHPHHFMENLLEKLKHSLSLTLSRFYPLSGRLVTHKTQHPPSYIVFVDCNNTDGARFIYATLDMTISDILSPVDVPPTIHSFFDHHKAINHDGHTMPLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNTWSQIFQAQSHQAQAHEYDVPISYQPIHNRWFPNNCSPPINLPFKHHDEFISRSEASLLRERIFQFSAESIAKLKAKANSESNTTEISSFQSLSALVWRSITRARSPPNEQKTSCRLAANCRSRMEPTLPEEYFGNCLHAVEAETTTGELLENGIGWAAWKLHVAVANLNDRVVLQFLQQWLESPLIYQIGRFFDPYCVMMGSSPRFNMYGNDFGMGKAVAARSGYANKFDGKVSSYPGRDGGGSIDLEVCLLPHIMSSLESDEEFMNALLPSNTLF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00472 461 Gene3D - 1 225 IPR023213 -
Spst9g00472 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 452 - -
Spst9g00472 461 Gene3D - 231 446 IPR023213 -
Spst9g00472 461 Pfam Transferase family 6 451 - -
Spst9g00472 461 FunFam Tryptamine hydroxycinnamoyl transferase 230 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00472 Spst-Chr9 4233678 4235063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00472 65 445 Monolignol Biosynthesis Gene Families AT5G48930 28.678 2.03e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00472 - - gmx:100789881 753.051