Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00471 ATGAATTCCCCCGTGGTTAATAGCGTTTCAGAATGTTTTATCAAGCCGTCCGGCCAAGCTCAAGAATCAGAGCAAATCTGCAATTTAACACCTTGGGATATTGCTATGATGTCTGTGCACCACATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACACTAGCTGATCAACAGGATTTCATAGAGAATCTGTTGGAGAAGCTGAAGCACTCTCTTTCTCTCACCCTCTCCCATTTCTACCCATTGGCTGGTCGCCTTGTCACCAACAAAACCAAACACCCTTCCTCTTATACTGTTTTTGTTGATTGCAACAACAGTAATGGAGCTAGATTCATCTATGCAACTTTGGATATGACAATATCTGACATCCTATCTCCCGTTGATGTCCCACCCATTGTTCACTCGTTCTTTGACCACCACAAAGCAGTCAACCATGATGGTCATACCATGCCACTATTGTCCATTAAAGTTACTGAACTAGTGGACGGTGTTTTCATAGGTTGCTCCATGAACCACAATATTGGTGATGGCACTTCGTATTGGAATTTCTTCAATGCATGGTCTGAGATCTTTCAGGATCAACCTCAAGGAAATGAACACGATGTTCCCATTTCATGCCATCCTATTCATAATAGGTGGTTTCCAGATGGTTGCGGTCCATTAATCAACCTTCCCTTCAAACATCACGATGAATTTATTAGCAGATTTGAAGCACCTTTGCTGAGAGGGAGATTCTTCCATTTTTCTGCAGAGTCTATTGCAAAGCTGAAAGCAAGGGCCAACTCAGAGTCCAAAACCACCAAAATCTCCTCTTTCCAATCCTTGTCAGCGCATGTTTGGAGATGCATAACACGGGCACGCCAGATGCCACACGGTGAGAGAACAAAGTGCACATTGGCCATAGATAATCGATCAAGAATGGAACCGCCTCTGCCACGCGAGTACTTTGGAAGTGCTGTTGATGTGGTGAGTGCTAAGAGCACGGTGGGAGAATTGCTGGAGAATAATCTAGGATGGGCTGCATGGAAGGTGCACCTGACTGTTGCGAACCATAACGACAGAGTGGTGAGAGACATGCTGGAAGAGTGGCTACAACATCCTGTGATCTACCAACACGGTGTGCACCTTGACTCGCGTTGTGTGATGCTATCAAGTTCTCCCAGGTTCAACGTGTATGGGATTGAATTCGGGATGGGAAAAGCGGTGGCAGTTCTGAGTGGGTATGCCAACAAATTTGATGGGAACGTGATAGCATATCCAGGACGTGATGGAGGTGGAACCATAGATTTTGAAATATCCCTTTCACCTGATGTAATGAGTGCACTTGAATCAAATGAAGAGTTCATGGAAGCTGTTTCTGTGCCCACCCCCCTGCACTAG 1380 0.4543 MNSPVVNSVSECFIKPSGQAQESEQICNLTPWDIAMMSVHHIQKGLLFKKPATLADQQDFIENLLEKLKHSLSLTLSHFYPLAGRLVTNKTKHPSSYTVFVDCNNSNGARFIYATLDMTISDILSPVDVPPIVHSFFDHHKAVNHDGHTMPLLSIKVTELVDGVFIGCSMNHNIGDGTSYWNFFNAWSEIFQDQPQGNEHDVPISCHPIHNRWFPDGCGPLINLPFKHHDEFISRFEAPLLRGRFFHFSAESIAKLKARANSESKTTKISSFQSLSAHVWRCITRARQMPHGERTKCTLAIDNRSRMEPPLPREYFGSAVDVVSAKSTVGELLENNLGWAAWKVHLTVANHNDRVVRDMLEEWLQHPVIYQHGVHLDSRCVMLSSSPRFNVYGIEFGMGKAVAVLSGYANKFDGNVIAYPGRDGGGTIDFEISLSPDVMSALESNEEFMEAVSVPTPLH 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00471 459 Gene3D - 7 220 IPR023213 -
Spst9g00471 459 FunFam Tryptamine hydroxycinnamoyl transferase 229 445 - -
Spst9g00471 459 Gene3D - 233 445 IPR023213 -
Spst9g00471 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 450 - -
Spst9g00471 459 Pfam Transferase family 9 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00471 Spst-Chr9 4147037 4148416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00471 66 443 Monolignol Biosynthesis Gene Families AT5G48930 26.667 2.21e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00471 - - vum:124831304 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00471 9 4147037 4148416 Spst9g00471 9 4147037 4148416 ECH