Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00470 ATGAATTCCCCGGTCGTTCGAAGCGTTTCAGAATGTTTTATCAAGCCGTCGGGTCAAACTCAAGAATCAGAGCATATCATCAATTTAACACCTTGGGATATTGCTATGCTGTCTATGCACTACATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACACTTGTTGATCAACAAGATTTCATAGAGAATCTGTTGGAGAAGCTGAAGCACTCTCTTTCTCTCACCCTCTTCCATTTTTATCCATTGGTAGGCCACCTTGTCACAAACAAAGACCCTTCCTCTTACACTATTTTCGTTGACTGCAACAACACTGATGGAGCAAGATTCATCTATGCAACTTTGGATATGACAATATCTGACATCCTATCTCCCGTTGATGTCCCACCCATTGTTCACTCATTCTTTGACTCCCACAAAGCAGTCAACCATGATGGTCACACCGAGCCACTGTTGTCCATTAAAGTTACTGAACTATTGGATGGTGTTTTCATAGGTTGTTCTATGAACCATGGTATTGGTGATGGAACTTCTTATTGGAATTTCTTCAACACATGGTCCGATATCTTTCAAGCTCAAGCCCATGAATACGACGTTCCCATCTCACGCCACCCTGTTCATAACCGGTGGTTTCCTGATGGTTGTGGTCCATTGATCAATCTTCCCTTCAAACGTCACGAAGAGTTTATAAGCAGATTTGAAGCACCCAATCTGAGAGACAAAATCTTCCGTTTTTCAGCAGCGTCTATTGCAAAGCTGAAAGCAAGGGCTAACTCAGAGTCCAAGACCACCAAAATCTCTTCGTTCCAATCCTTATCAGCTCATGTATGGAGATGCATAACACGCGCACGTCAGCTTCCACATGATGAGATAACAAGTTGCAAATTGGCCATAAATAATCGAGCAAGAATGGAGCCGCCTCTGCCGCATGAATACTTTGGAAACTCTGTTGATGTGGTGAGTGCGGGGACCAAAGTAGGGGAATTGCTGGAGAACGATCTAGGATGGGCTGCATGGAAGGTGCACCTGACTGTTGCTAACCAAAACGACAGAGCAGTGCGTGACGGTGTCAAAGAGTGGTTACAGCGCCCTGTGGTGTACCAACTTGGCGTGCACTTTGATTCGTGCAGTGTGACCGTGTCAAGTTCGCCGAGGTTCGACATGTATGGGAATGAATTTGGGATGGGAAAAGCTGTGGCAGTTCTGAGTGGATATGCCAACAAATTCGATGGGAATGTGACTGCATATCCAGGTCGTGAAGGAGGGGGAAGCATAGATTTGGAACTGTCCCTTCCGCCCAATGCAATGAGCTTGCTAGAATCAGATGAGGAGTTTATGGAAGCTGTTTCTGTGTCCATGTAA 1359 0.4533 MNSPVVRSVSECFIKPSGQTQESEHIINLTPWDIAMLSMHYIQKGLLFKKPATLVDQQDFIENLLEKLKHSLSLTLFHFYPLVGHLVTNKDPSSYTIFVDCNNTDGARFIYATLDMTISDILSPVDVPPIVHSFFDSHKAVNHDGHTEPLLSIKVTELLDGVFIGCSMNHGIGDGTSYWNFFNTWSDIFQAQAHEYDVPISRHPVHNRWFPDGCGPLINLPFKRHEEFISRFEAPNLRDKIFRFSAASIAKLKARANSESKTTKISSFQSLSAHVWRCITRARQLPHDEITSCKLAINNRARMEPPLPHEYFGNSVDVVSAGTKVGELLENDLGWAAWKVHLTVANQNDRAVRDGVKEWLQRPVVYQLGVHFDSCSVTVSSSPRFDMYGNEFGMGKAVAVLSGYANKFDGNVTAYPGREGGGSIDLELSLPPNAMSLLESDEEFMEAVSVSM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00470 452 Pfam Transferase family 10 445 - -
Spst9g00470 452 Gene3D - 225 440 IPR023213 -
Spst9g00470 452 FunFam Tryptamine hydroxycinnamoyl transferase 224 441 - -
Spst9g00470 452 Gene3D - 7 216 IPR023213 -
Spst9g00470 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00470 Spst-Chr9 4142226 4143584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00470 66 439 Monolignol Biosynthesis Gene Families AT5G48930 27.318 1.23e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00470 - - vum:124831304 807.749