Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00469 ATGAATACCCGGGTCGTAGAACGCGTTTCAGAATGCTTCATCAAACCGAAGCTCTCCACCCACGAATCAAACCGAATAAGCCACTTAACACCTTGGGATATTGCCATGTTGTCTGCGCACTATATCCAAAAGGGTCTTCTCTTCAAGAAGCCTCCTTCACCACATGCTAATCAACGTGATTTCATACAGAATCTCTTGGAGAAGCTTAAACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTGTCCGGTTGCCTTGTCACCCACAAAACAGAACACCCTCCTTTCTATTCTGTTTTCGTTGATTGCACAAACAATTTTGGAGCTAGATTCATCCATGCAACGATAGATATGACCATATCTGATATCCTCTCCCCAGATGACGTCCCACCCATTGTTCACTCATTCTTTGACCACGATAGAGCCCTCAACCACGATGGTCACACCATGCCGTTGTTGTCCATACAAGTCACTGAATTGCTGGATGGTGTTTTCATGGGTTGTTCTATGAACCATGCTATTGGTGATGGAACTTCTTTTTGGAATTTCTTCAACACATGGTCCGAGATCTTCCAAGCTCAATCTCAAGGCCATGAACATGATGTTCCCATATCGCGCCGTCCTTTTCACAAACGCTGGTTTCCAGATGATTGCGTTCCACCAATCAATCTTCCTTTCAAACACCACGACGAGTTTATCAGCAGATATGAAGCACCCTTGATGAGAGAGAGATTCTTCCACTTTTCAGCAGAGTCTATAGCAAAATTGAAAGCAAAAGCCAACTCGGAATGCAATACCACAAAAATTTCTTCCTTCCAATCACTCTCAGCACTTGTTTGGAGATGCATAACTCGGGCGCGGCGCTTGGCGTATGATGAGAGAACAAGTTGCAAGTTAGCTACGAACAACCGAACAAGAATGGAACCGCCACTACCTCAGGAGTACTTTGGAAACTCAATTCATACACTGAGCGCAGGATCAGCAACCTGGGGGGAATTGCTTGAGAATGGACTTGGATGGGCAGCATGGAAGTTGCACCTGGCTGTTATAAAGCACAACGATAGAGTGGTGTTGAAATCGGTGAGAGAATGGTTAGAGTCTCCTCTGATATATCAACTTGGTCGGTATTTTGACCGGAACTGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTACGGGAATGAATTTGGCATGGGGAAAGCTGTGGCAGTAAGAAGTGGTTATGCCAACAAGTTTGATGGAAAAGTTACGTCATATCCAAGCCATGAAGGAGGAGGAAGCGTTGATTTAGAAGTATGTCTTTCGCCAGATGTAATGAGTGCACTAGAATCCGACCAGGAGTTCATGAATTCAGTTTCAGTTTCCAATCCTCACTAA 1383 0.4469 MNTRVVERVSECFIKPKLSTHESNRISHLTPWDIAMLSAHYIQKGLLFKKPPSPHANQRDFIQNLLEKLKHSLSLTLSHFYPLSGCLVTHKTEHPPFYSVFVDCTNNFGARFIHATIDMTISDILSPDDVPPIVHSFFDHDRALNHDGHTMPLLSIQVTELLDGVFMGCSMNHAIGDGTSFWNFFNTWSEIFQAQSQGHEHDVPISRRPFHKRWFPDDCVPPINLPFKHHDEFISRYEAPLMRERFFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARRLAYDERTSCKLATNNRTRMEPPLPQEYFGNSIHTLSAGSATWGELLENGLGWAAWKLHLAVIKHNDRVVLKSVREWLESPLIYQLGRYFDRNCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPSHEGGGSVDLEVCLSPDVMSALESDQEFMNSVSVSNPH 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00469 460 Gene3D - 234 447 IPR023213 -
Spst9g00469 460 Pfam Transferase family 6 451 - -
Spst9g00469 460 Gene3D - 7 220 IPR023213 -
Spst9g00469 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 452 - -
Spst9g00469 460 FunFam Tryptamine hydroxycinnamoyl transferase 228 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00469 Spst-Chr9 4136804 4138186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00469 67 445 Monolignol Biosynthesis Gene Families AT5G48930 28.606 1.70e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00469 - - gmx:100787228 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00469 9 4136804 4138186 Spst9g00469 9 4136804 4138186 ECH