Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00454 ATGGTGGCAGTAGCAATAGGAAAAAGCCTCCCCATTCAGCCCCGTCCTTTATTCAACAGTAAAAGCATAGATCGAGCTTCATCAGCAGGAAGATTCTCTTGGCTTGGGCATGGTTCTGCTGTCACTCCACATTATAGACAAACTTGTGTAGCAGCGCAACAGCGACCTACATGGCTCCCAGGACTTGATCCTCCGCCTTATCTTGATGGAACTCTCGCTGGAGATTTTGGATTCGACCCACTTGGGCTTGCAGAGGATCCTGGAAACTTAAGGTGGTATGTGCAGGCAGAGCTGGTTCATTCTCGCTTTGCAATGCTTGGGGTCTTGGGAATTCTAGTGACAGATCTGCTTCGCGTCACAGGAATTAGTAAGATACCAGTTTGGTTTGAAGCTGGTGCAGTAAAATACGACCTTGCCAATACAGAGACACTTTTCATTGTTCAACTACTTCTGATGGGGTTTGCCGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGATCTCAAGCGAAAGAGGGGTCCTTCTTTGGGTTGGAAGCTTCATTCGAAGGCTTAGAGCCAGGGTACCCAGGGGGACCTCTGCTTAATCCTCTTGGCCTAGCTAAAGACATTAAAAACGCTCATGACTGGAAGCTTAAAGAGATTAAAAATGGGCGACTTGCAATGATAGCAATGCTTGGCATCTTTGTACAAGCTTCGGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCACGTTTCCAATCCATGGCATAAAACTATTATTCAGACCTTTGCCAGTTCTGGTTCTTAG 795 0.4604 MVAVAIGKSLPIQPRPLFNSKSIDRASSAGRFSWLGHGSAVTPHYRQTCVAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLAEDPGNLRWYVQAELVHSRFAMLGVLGILVTDLLRVTGISKIPVWFEAGAVKYDLANTETLFIVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLEASFEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMIAMLGIFVQASVTHVGPIDNLVEHVSNPWHKTIIQTFASSGS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00454 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 48 259 IPR001344 GO:0009765|GO:0016020
Spst9g00454 264 FunFam Chlorophyll a-b binding protein, chloroplastic 56 263 - -
Spst9g00454 264 Pfam Chlorophyll A-B binding protein 64 232 IPR022796 -
Spst9g00454 264 SUPERFAMILY Chlorophyll a-b binding protein 50 261 - -
Spst9g00454 264 Gene3D Chlorophyll a/b binding protein domain 57 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00454 Spst-Chr9 3998504 3999872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00454 47 259 Chloroplast and Mitochondria Gene Families AT3G61470 45.327 4.12e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00454 K08911 - gmx:100804934 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00454 9 3998504 3999872 Spst9g00454 9 3998504 3999872 ECH